RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 IL1RAPL1Q9NZN1 696 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 PCDHGA6Q9Y5G7 932 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 MRFAP1Q9Y605 127 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
SMAD3-213ENST00000560175 CFAP46Q8IYW2 2715 aa12.77□□□□□ -0.36
SMAD3-213ENST00000560175 GSAPA4D1B5 854 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 KIAA0754O94854 1291 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 SEC31AO94979 1220 aaKnown RBP12.77□□□□□ -0.37
SMAD3-213ENST00000560175 MT-ND3P03897 115 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 UGT2B7P16662 529 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 CD9P21926 228 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 F8A1P23610 371 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 CSE1LP55060 971 aaKnown RBP12.77□□□□□ -0.37
SMAD3-213ENST00000560175 THOC5Q13769 683 aaKnown RBP12.77□□□□□ -0.37
SMAD3-213ENST00000560175 FRG1Q14331 258 aaKnown RBP12.77□□□□□ -0.37
SMAD3-213ENST00000560175 CRYMQ14894 314 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 LINC00303Q3SY05 128 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 HSP90AA5PQ58FG0 334 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 SPANXN3Q5MJ09 141 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 TMTC4Q5T4D3 741 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 NEK10Q6ZWH5 1172 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 KLHL7Q8IXQ5 586 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 ZSCAN1Q8NBB4 408 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMAD3-213ENST00000560175 C2CD4AQ8NCU7 369 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-213ENST00000560175 OR2L8Q8NGY9 312 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 KCNJ9Q92806 393 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 RAD51AP1Q96B01 352 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 FBXO5Q9UKT4 447 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 PADI1Q9ULC6 663 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 TDRKHQ9Y2W6 561 aaKnown RBP12.77□□□□□ -0.37
SMAD3-213ENST00000560175 PCDHB3Q9Y5E6 796 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 KLK4Q9Y5K2 254 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 TEX264Q9Y6I9 313 aa12.77□□□□□ -0.37
SMAD3-213ENST00000560175 FER1L5A0AVI2 2057 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 E7ESA3 106 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 RASGRF2O14827 1237 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 TTI1O43156 1089 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 PSIP1O75475 530 aaKnown RBP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 HAUS5O94927 633 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 FKBP9O95302 570 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 ERGP11308 486 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 CHRM3P20309 590 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 GABRB3P28472 473 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 CCNFP41002 786 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 SLC1A2P43004 574 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 ARL4DP49703 201 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 TIAL1Q01085 375 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 GPR19Q15760 415 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 ZIC1Q15915 447 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 STEAP4Q687X5 459 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 CYHR1Q6ZMK1 362 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 ZNF572Q7Z3I7 529 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 UNC5BQ8IZJ1 945 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 FBXO15Q8NCQ5 510 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 SPATA4Q8NEY3 305 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 DENND1AQ8TEH3 1009 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 SLC39A7Q92504 469 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 TCTN2Q96GX1 697 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 SLC30A3Q99726 388 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 WDR83Q9BRX9 315 aaKnown RBP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 AKIRIN1Q9H9L7 192 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 GPN2Q9H9Y4 310 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 FAM60AQ9NP50 221 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 C20orf96Q9NUD7 363 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-213ENST00000560175 IL17BQ9UHF5 180 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 DHRS7Q9Y394 339 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 NFS1Q9Y697 457 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 HEATR5BQ9P2D3 2071 aa12.76□□□□□ -0.37
SMAD3-213ENST00000560175 A0A0J9YY10 115 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 GFYI3L273 518 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 EIF3FO00303 357 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-213ENST00000560175 BANF1O75531 89 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 PVRP15151 417 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 RORAP35398 523 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 ITGA8P53708 1063 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 CYP2A13Q16696 494 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 ACSBG2Q5FVE4 666 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 CNSTQ6PJW8 725 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 CDHR3Q6ZTQ4 885 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 KIAA0408Q6ZU52 694 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 KCNMB4Q86W47 210 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 PDIK1LQ8N165 341 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 DNAJC22Q8N4W6 341 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 ZBTB2Q8N680 514 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 OTUD6BQ8N6M0 293 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 OR1L3Q8NH93 324 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 CFAP61Q8NHU2 1237 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 GIMAP7Q8NHV1 300 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 MAGEC3Q8TD91 643 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 SLC22A18Q96BI1 424 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 SNF8Q96H20 258 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 TRIM51Q9BSJ1 452 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 FAM167BQ9BTA0 163 aa12.75□□□□□ -0.37
SMAD3-213ENST00000560175 AARSD1Q9BTE6 412 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms