RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 KLHL20Q9Y2M5 609 aa14.36□□□□□ -0.11
RABGGTA-211ENST00000559850 MED16Q9Y2X0 877 aa14.36□□□□□ -0.11
RABGGTA-211ENST00000559850 IGSF10Q6WRI0 2623 aa14.36□□□□□ -0.11
RABGGTA-211ENST00000559850 MATN2O00339 956 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 KPNA5O15131 536 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 C1orf105O95561 183 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 NTRK1P04629 796 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 CLCN7P51798 805 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 ACY1Q03154 408 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 FASTKD3Q14CZ7 662 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 ZIC1Q15915 447 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 KYNUQ16719 465 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 TRMT10BQ6PF06 316 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 SPESP1Q6UW49 350 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 PCSK4Q6UW60 755 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 UNC5DQ6UXZ4 953 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 KMT5CQ86Y97 462 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 DCUN1D3Q8IWE4 304 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 ZNF501Q96CX3 271 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 FAM167BQ9BTA0 163 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 PITPNM3Q9BZ71 974 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 AKIRIN1Q9H9L7 192 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 FAM60AQ9NP50 221 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 IL17BQ9UHF5 180 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 BTRCQ9Y297 605 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 FAM208BQ5VWN6 2430 aa14.35□□□□□ -0.11
RABGGTA-211ENST00000559850 H3BMM5 538 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 HCRTR1O43613 425 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 CTSBP07858 339 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 SPTBP11277 2137 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 F8A1P23610 371 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 MAP4P27816 1152 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 GABRB3P28472 473 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 RAB28P51157 221 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 PGGT1BP53609 377 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 ADARP55265 1226 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 ARL4CP56559 192 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 GBX1Q14549 363 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 HIF1AQ16665 826 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 KLHL38Q2WGJ6 581 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 DEFB110Q30KQ9 67 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 TMTC4Q5T4D3 741 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 C6orf15Q6UXA7 325 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 CDHR3Q6ZTQ4 885 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 PDIK1LQ8N165 341 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 OR1L3Q8NH93 324 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 CERS2Q96G23 380 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 GPR21Q99679 349 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 GPN2Q9H9Y4 310 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 PPANQ9NQ55 473 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 ZC3H7BQ9UGR2 993 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 MRPS18BQ9Y676 258 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 TEX264Q9Y6I9 313 aa14.34□□□□□ -0.11
RABGGTA-211ENST00000559850 TMEM150CB9EJG8 249 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 RASGRF2O14827 1237 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 SCRG1O75711 98 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 PRB1P04280 392 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 RPN2P04844 631 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 CD9P21926 228 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 STAT5AP42229 794 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 TUBB4BP68371 445 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 PDIA2Q13087 525 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 TUBB2AQ13885 445 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 RBM20Q5T481 1227 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 FAM199XQ6PEV8 388 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 CAPN12Q6ZSI9 719 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 TMEM126BQ8IUX1 230 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 CPNE9Q8IYJ1 553 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 CARFQ8N187 725 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 ESX1Q8N693 406 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 C19orf47Q8N9M1 422 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 C2CD4AQ8NCU7 369 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 FBXO36Q8NEA4 188 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 CALML6Q8TD86 181 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 DENND1AQ8TEH3 1009 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 SNRNP27Q8WVK2 155 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 UBL7Q96S82 380 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 AARSD1Q9BTE6 412 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 TUBB2BQ9BVA1 445 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 CCDC68Q9H2F9 335 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 OR6C2Q9NZP2 312 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 CROTQ9UKG9 612 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 SLC39A10Q9ULF5 831 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 VPS9D1Q9Y2B5 631 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 MGAQ8IWI9 3026 aa14.33□□□□□ -0.12
RABGGTA-211ENST00000559850 A0A0J9YY10 115 aa14.32□□□□□ -0.12
RABGGTA-211ENST00000559850 FAM187AA6NFU0 413 aa14.32□□□□□ -0.12
RABGGTA-211ENST00000559850 ARHGEF33A8MVX0 844 aa14.32□□□□□ -0.12
RABGGTA-211ENST00000559850 NKX2-8O15522 239 aa14.32□□□□□ -0.12
RABGGTA-211ENST00000559850 KDM1AO60341 852 aa14.32□□□□□ -0.12
RABGGTA-211ENST00000559850 MATN4O95460 622 aa14.32□□□□□ -0.12
RABGGTA-211ENST00000559850 TTC4O95801 387 aa14.32□□□□□ -0.12
RABGGTA-211ENST00000559850 AHSGP02765 367 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms