RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 TPH1P17752 444 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 ACADLP28330 430 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 CTNNA1P35221 906 aaKnown RBP8.84□□□□□ -0.99
HDDC3-204ENST00000559834 PTPN7P35236 360 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 CYLC1P35663 651 aaPredicted RBP8.84□□□□□ -0.99
HDDC3-204ENST00000559834 GABRA4P48169 554 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 BRD3Q15059 726 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 ZIC1Q15915 447 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 SLC5A12Q1EHB4 618 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 SKOR2Q2VWA4 1001 aaPredicted RBP8.84□□□□□ -0.99
HDDC3-204ENST00000559834 SYTL3Q4VX76 610 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 MRPL14Q6P1L8 145 aaKnown RBP8.84□□□□□ -0.99
HDDC3-204ENST00000559834 Q6ZS92 163 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 ARHGEF18Q6ZSZ5 1173 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 TRIM73Q86UV7 250 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 DNAJC22Q8N4W6 341 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 OR5AR1Q8NGP9 310 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 OR5K2Q8NHB8 316 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 ELMO1Q92556 727 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 SLC22A18Q96BI1 424 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 BARD1Q99728 777 aaKnown RBP8.84□□□□□ -0.99
HDDC3-204ENST00000559834 NRTNQ99748 197 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 LRRC40Q9H9A6 602 aa8.84□□□□□ -0.99
HDDC3-204ENST00000559834 DHCR7Q9UBM7 475 aaKnown RBP8.84□□□□□ -0.99
HDDC3-204ENST00000559834 PJA2O43164 708 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 IPO7O95373 1038 aaKnown RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 CLDN1O95832 211 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 GAS8O95995 478 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 RPN2P04844 631 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 ITGAXP20702 1163 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 MMP11P24347 488 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 ITGA3P26006 1051 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 COL8A1P27658 744 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 PPARGP37231 505 aaPredicted RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 DCTP40126 519 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 PER3P56645 1201 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 TBX2Q13207 712 aaPredicted RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 POU6F1Q14863 301 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 SLC9A5Q14940 896 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 DBN1Q16643 649 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 DEFB110Q30KQ9 67 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 P3H1Q32P28 736 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 DNAJC21Q5F1R6 531 aaKnown RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 ZC3H12BQ5HYM0 836 aaKnown RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 CRB2Q5IJ48 1285 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 AGAP7PQ5VUJ5 663 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 YOD1Q5VVQ6 348 aaPredicted RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 PRAMEF13Q5VWM6 474 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 KCTD11Q693B1 232 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 PACS1Q6VY07 963 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 OVCH1Q7RTY7 1134 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 PPP1R32Q7Z5V6 425 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 LINC00523Q86TU6 105 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 MCATQ8IVS2 390 aaKnown RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 KLHDC8BQ8IXV7 354 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 PIANPQ8IYJ0 282 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 SLC34A3Q8N130 599 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 ST6GALNAC3Q8NDV1 305 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 DNAJB14Q8TBM8 379 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 UBE2Q2Q8WVN8 375 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 AGAP4Q96P64 663 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 WDR77Q9BQA1 342 aaPredicted RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 TSSK1BQ9BXA7 367 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 INTS7Q9NVH2 962 aaKnown RBP8.83□□□□□ -1
HDDC3-204ENST00000559834 SPHK1Q9NYA1 384 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 EURLQ9NYK6 297 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 IL1RAPL1Q9NZN1 696 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 CDYLQ9Y232 598 aa8.83□□□□□ -1
HDDC3-204ENST00000559834 A0A1B0GX78 115 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 SLC5A10A0PJK1 596 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 MROH6A6NGR9 719 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
HDDC3-204ENST00000559834 HCRTR1O43613 425 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 ONECUT2O95948 504 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 UMODP07911 640 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 PSMA3P25788 255 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 MSNP26038 577 aaKnown RBP8.82□□□□□ -1
HDDC3-204ENST00000559834 RAB28P51157 221 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 FAM214AQ32MH5 1076 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 TCTE1Q5JU00 501 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 ZNF787Q6DD87 383 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 TTC23LQ6PF05 361 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 TTLL10Q6ZVT0 673 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 CUZD1Q86UP6 607 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 FAM71DQ8N9W8 422 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 FLVCR1-AS1Q8TAF5 88 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 PPP4R1Q8TF05 950 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 FKBP10Q96AY3 582 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 RANBP9Q96S59 729 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 FAM118BQ9BPY3 351 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 TSPY26PQ9H489 355 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 EPS8L2Q9H6S3 715 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 WDR54Q9H977 334 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 MRM3Q9HC36 420 aaKnown RBP8.82□□□□□ -1
HDDC3-204ENST00000559834 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.82□□□□□ -1
HDDC3-204ENST00000559834 CDC23Q9UJX2 597 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 NXT1Q9UKK6 140 aaKnown RBP8.82□□□□□ -1
HDDC3-204ENST00000559834 PCDHGA10Q9Y5H3 936 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 PRSS21Q9Y6M0 314 aa8.82□□□□□ -1
HDDC3-204ENST00000559834 HIVEP3Q5T1R4 2406 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 581.5 ms