RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 HOMER3Q9NSC5 361 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 IMP3Q9NV31 184 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 OCIAD1Q9NX40 245 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 SNX12Q9UMY4 172 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 NEU2Q9Y3R4 380 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 CFAP20Q9Y6A4 193 aaKnown RBP5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 PRSS21Q9Y6M0 314 aa5.88□□□□□ -1.47
CTDSPL2-204ENST00000558966 C17orf113A0A1B0GUU1 675 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 EFCAB7A8K855 629 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 A8MU76 341 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 B4E171 279 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZNF185O15231 689 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 KLK10O43240 276 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 KIF5CO60282 957 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR1I1O60431 355 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 TMEM63AO94886 807 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 GAS8O95995 478 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 C9P02748 559 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 POLBP06746 335 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC35G4P0C7Q5 338 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 MGAT1P26572 445 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 CSTF2P33240 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 TSPAN7P41732 249 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 MAGEA6P43360 314 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PREPP48147 710 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 LEPRP48357 1165 aaKnown RBP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PPM1FP49593 454 aaPredicted RBP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 TERF1P54274 439 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PPP1CAP62136 330 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 CDK16Q00536 496 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 GPS1Q13098 491 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 SEMA3AQ14563 771 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 ITIH4Q14624 930 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 TGIF1Q15583 401 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PRAMEF13Q5VWM6 474 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 CAPRIN2Q6IMN6 1127 aaKnown RBP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 CCDC137Q6PK04 289 aaKnown RBP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PACS1Q6VY07 963 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 NLRP9Q7RTR0 991 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZFAND4Q86XD8 727 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PPHLN1Q8NEY8 458 aaKnown RBP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 ACTRT1Q8TDG2 376 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 HEXDCQ8WVB3 486 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 CPT1BQ92523 772 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PEX13Q92968 403 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 ART4Q93070 314 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 SGSM3Q96HU1 749 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 C12orf66Q96MD2 445 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 TGM7Q96PF1 710 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR52A5Q9H2C5 316 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PRORYQ9H606 182 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 COG4Q9H9E3 785 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 TREX1Q9NSU2 369 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 SYBUQ9NX95 663 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 SIDT1Q9NXL6 827 aaKnown RBP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 AKAP7Q9P0M2 348 aaPredicted RBP5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 ACSL5Q9ULC5 683 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 PCDHGA3Q9Y5H0 932 aa5.87□□□□□ -1.47
CTDSPL2-204ENST00000558966 TLN1Q9Y490 2541 aaKnown RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 CES2O00748 559 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 KIF1CO43896 1103 aaKnown RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 PHF2O75151 1096 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 UBOX5O94941 541 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 AP2A2O94973 939 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 KRT14P02533 472 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 ANKRD34CP0C6C1 535 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 AMD1P17707 334 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 RAB6AP20340 208 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 NMBRP28336 390 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 PDHA2P29803 388 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 NSG1P42857 185 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 FNTAP49354 379 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 PRAMEP78395 509 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 SRSF6Q13247 344 aaKnown RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 LAMB3Q13751 1172 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 PCID2Q5JVF3 399 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 LRRC8BQ6P9F7 803 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 CES3Q6UWW8 571 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 CAND1Q86VP6 1230 aaKnown RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 FAM129CQ86XR2 697 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 DTX1Q86Y01 620 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 PLXDC1Q8IUK5 500 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 CFAP206Q8IYR0 622 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR4L1Q8NH43 312 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 KLHL6Q8WZ60 621 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 ANP32BQ92688 251 aaKnown RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 C9orf72Q96LT7 481 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 FCRL3Q96P31 734 aaPredicted RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 TAAR9Q96RI9 348 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 NAP1L3Q99457 506 aaPredicted RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 NRTNQ99748 197 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 CCM2Q9BSQ5 444 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 DPH1Q9BZG8 443 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 B3GNT4Q9C0J1 378 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 IL22Q9GZX6 179 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 RAB33BQ9H082 229 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 GSX1Q9H4S2 264 aaPredicted RBP5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 KIR3DX1Q9H7L2 352 aa5.86□□□□□ -1.47
CTDSPL2-204ENST00000558966 CPNE5Q9HCH3 593 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms