RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SAT1P21673 171 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PRDX3P30048 256 aaKnown RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 ECHS1P30084 290 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PKLRP30613 574 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 SLC5A2P31639 672 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 STX2P32856 288 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 TSPAN7P41732 249 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 RGS4P49798 205 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 RAB28P51157 221 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PCBP4P57723 403 aaKnown RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 GRB7Q14451 532 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 CCSMST1Q4G0I0 132 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 TMEM164Q5U3C3 297 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 FBXO38Q6PIJ6 1188 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PAQR3Q6TCH7 311 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PIWIL4Q7Z3Z4 852 aaKnown RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 CLEC14AQ86T13 490 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 ZC3HC1Q86WB0 502 aaKnown RBP11.97□□□□□ -0.49
SMAD3-205ENST00000558428 CTAGE3PQ8IX95 158 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 IFT20Q8IY31 132 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 FBF1Q8TES7 1133 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 KLHL6Q8WZ60 621 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PPM1MQ96MI6 270 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 IL17FQ96PD4 163 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 TAAR9Q96RI9 348 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 RAB11FIP5Q9BXF6 653 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 TSPYL1Q9H0U9 437 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 RHOJQ9H4E5 214 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 SLC39A1Q9NY26 324 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 ACTR10Q9NZ32 417 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 SEMA5BQ9P283 1151 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 RAXQ9Y2V3 346 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 PCDHGA7Q9Y5G6 932 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
SMAD3-205ENST00000558428 SDK2Q58EX2 2172 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 KRT87PA6NCN2 255 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 ARHGEF33A8MVX0 844 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 ESPNB1AK53 854 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 ISM1B1AKI9 464 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 C9orf172C9J069 976 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 NVLO15381 856 aaKnown RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 PSIP1O75475 530 aaKnown RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 NELFEP18615 380 aaKnown RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 CD9P21926 228 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 FDXRP22570 491 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 ARL4DP49703 201 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 PGGT1BP53609 377 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 RAB15P59190 212 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 SH3BP2P78314 561 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 MC2RQ01718 297 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 FOXM1Q08050 763 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 KBTBD12Q3ZCT8 623 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 TEX35Q5T0J7 233 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 ANKS6Q68DC2 871 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 LRRC8EQ6NSJ5 796 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 SPESP1Q6UW49 350 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 CYHR1Q6ZMK1 362 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 TAX1BP1Q86VP1 789 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 KMT5CQ86Y97 462 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 CARFQ8N187 725 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 RAB42Q8N4Z0 105 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 C2orf73Q8N5S3 287 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 PPM1NQ8N819 430 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 BMPERQ8N8U9 685 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 LMNTD1Q8N9Z9 388 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 OR2L8Q8NGY9 312 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 SNIP1Q8TAD8 396 aaKnown RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 EEF1AKMT1Q8WVE0 214 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 PMEPA1Q969W9 287 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 LINGO1Q96FE5 620 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 NAF1Q96HR8 494 aaKnown RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 VPS39Q96JC1 886 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 SLC41A2Q96JW4 573 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 OLFM1Q99784 485 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 CPNE1Q99829 537 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 CTRCQ99895 268 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 MENTQ9BUN1 341 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 C1GALT1Q9NS00 363 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 SOHLH2Q9NX45 425 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 SIDT1Q9NXL6 827 aaKnown RBP11.96□□□□□ -0.49
SMAD3-205ENST00000558428 SPHK1Q9NYA1 384 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 NINJ2Q9NZG7 142 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 FOXJ2Q9P0K8 574 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 B3GALT1Q9Y5Z6 326 aa11.96□□□□□ -0.49
SMAD3-205ENST00000558428 USP24Q9UPU5 2620 aa11.96□□□□□ -0.5
SMAD3-205ENST00000558428 SLC9B1P1A6NJY1 282 aa11.95□□□□□ -0.5
SMAD3-205ENST00000558428 ZBTB14O43829 449 aa11.95□□□□□ -0.5
SMAD3-205ENST00000558428 ZBTB11O95625 1053 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-205ENST00000558428 SYF2O95926 243 aaKnown RBP11.95□□□□□ -0.5
SMAD3-205ENST00000558428 C1QAP02745 245 aa11.95□□□□□ -0.5
SMAD3-205ENST00000558428 UGT2B7P16662 529 aa11.95□□□□□ -0.5
SMAD3-205ENST00000558428 MAP4P27816 1152 aaKnown RBP11.95□□□□□ -0.5
SMAD3-205ENST00000558428 PEBP1P30086 187 aaKnown RBP11.95□□□□□ -0.5
SMAD3-205ENST00000558428 PHBP35232 272 aa11.95□□□□□ -0.5
SMAD3-205ENST00000558428 GP5P40197 560 aa11.95□□□□□ -0.5
SMAD3-205ENST00000558428 SLC12A2P55011 1212 aa11.95□□□□□ -0.5
SMAD3-205ENST00000558428 IL2P60568 153 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms