RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 ASB3Q9Y575 518 aa7.1□□□□□ -1.27
MARK3-212ENST00000558223 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 TMEM233B4DJY2 109 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 G3V2L1 256 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 MSI1O43347 362 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 KDELR3O43731 214 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 PRAMEF4O60810 478 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 USP12O75317 370 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 PMPCBO75439 489 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 TM7SF2O76062 418 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SEC24DO94855 1032 aaPredicted RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 PEX11BO96011 259 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 LTA4HP09960 611 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 UBL4AP11441 157 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 TPH1P17752 444 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 DDCP20711 480 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 AKT1P31749 480 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SLC6A11P48066 632 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SLC11A1P49279 550 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 HSD17B7P56937 341 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 RPS3AP61247 264 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 MXRA7P84157 204 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 DBPQ10586 325 aaPredicted RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 SF3A3Q12874 501 aaKnown RBP eCLIP7.09□□□□□ -1.27
MARK3-212ENST00000558223 ZNF177Q13360 481 aaPredicted RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 ITGA9Q13797 1035 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 POU6F1Q14863 301 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 HERC3Q15034 1050 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 CCDC6Q16204 474 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 CNGA3Q16281 694 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SLC5A9Q2M3M2 681 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 AARS2Q5JTZ9 985 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 ANO7Q6IWH7 933 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 LRRC8EQ6NSJ5 796 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SHQ1Q6PI26 577 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 C11orf88Q6PI97 169 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 EPGNQ6UW88 154 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 C16orf89Q6UX73 402 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SYT13Q7L8C5 426 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 EFL1Q7Z2Z2 1120 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 ITIH5Q86UX2 942 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 RASGRP3Q8IV61 690 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 CCDC28AQ8IWP9 274 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 TP53INP2Q8IXH6 220 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.09□□□□□ -1.27
MARK3-212ENST00000558223 KIF2BQ8N4N8 673 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 CPSF7Q8N684 471 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 SLC15A4Q8N697 577 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 DNAJC5GQ8N7S2 189 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 ZNF557Q8N988 423 aaPredicted RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 ATAD1Q8NBU5 361 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 RP9Q8TA86 221 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 WDR48Q8TAF3 677 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 ZNF461Q8TAF7 563 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 AGAP11Q8TF27 550 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 PABPC5Q96DU9 382 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 THOC1Q96FV9 657 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 TOE1Q96GM8 510 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 PSKH2Q96QS6 385 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 AGAP2Q99490 1192 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SEPT5Q99719 369 aaPredicted RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 CCT7Q99832 543 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 MGME1Q9BQP7 344 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 MECRQ9BV79 373 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 ADGRE3Q9BY15 652 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 CADM1Q9BY67 442 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 NMUR2Q9GZQ4 415 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 NT5MQ9NPB1 228 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 ARL8BQ9NVJ2 186 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 HCFC1R1Q9NWW0 138 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 MARCH5Q9NX47 278 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SIDT1Q9NXL6 827 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 GALNT8Q9NY28 637 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 PLA2G3Q9NZ20 509 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 KCMF1Q9P0J7 381 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 BLOC1S6Q9UL45 172 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 PRPF19Q9UMS4 504 aaKnown RBP7.09□□□□□ -1.27
MARK3-212ENST00000558223 DAPP1Q9UN19 280 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 TBC1D30Q9Y2I9 924 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 VWA7Q9Y334 891 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 SNX10Q9Y5X0 201 aa7.09□□□□□ -1.27
MARK3-212ENST00000558223 A0A1B0GVM2 712 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 RGSL1A5PLK6 1076 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 TCAF2A6NFQ2 919 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 C2orf81A6NN90 581 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 TBKBP1A7MCY6 615 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 TARM1B6A8C7 271 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 STX16-NPEPL1H3BU86 382 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 RAB27BO00194 218 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 MATN2O00339 956 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 STX16O14662 325 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 TSPAN4O14817 238 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 LIN7AO14910 233 aaPredicted RBP7.08□□□□□ -1.28
MARK3-212ENST00000558223 KLK10O43240 276 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 COQ9O75208 318 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 RPP40O75818 363 aaKnown RBP7.08□□□□□ -1.28
MARK3-212ENST00000558223 CCNDBP1O95273 360 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 ANP32DO95626 131 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 EFEMP2O95967 443 aa7.08□□□□□ -1.28
MARK3-212ENST00000558223 MT-CYBP00156 380 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms