RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 KLHL30Q0D2K2 578 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 Q0VFX4 171 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ZBTB17Q13105 803 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 PDK1Q15118 436 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 NKG7Q16617 165 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 BCL7AQ4VC05 210 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 TEX44Q53QW1 395 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 KRTCAP3Q53RY4 240 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 SPESP1Q6UW49 350 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 TTLL10Q6ZVT0 673 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ZNF571Q7Z3V5 609 aaPredicted RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 ADGRF3Q8IZF5 1079 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 DNAJC22Q8N4W6 341 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 SLC25A41Q8N5S1 370 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 PQLC3Q8N755 202 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 C19orf47Q8N9M1 422 aaKnown RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 PHC3Q8NDX5 983 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 CHDHQ8NE62 594 aaPredicted RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 OR11G2Q8NGC1 345 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 OR52E1Q8NGJ3 308 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 SPATA22Q8NHS9 363 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 HM13Q8TCT9 377 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ADAMTS18Q8TE60 1221 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 TFGQ92734 400 aaPredicted RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 TADA1Q96BN2 335 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 BTBD6Q96KE9 485 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 RMDN2Q96LZ7 410 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 TAAR6Q96RI8 345 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ENKD1Q9H0I2 346 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ISCUQ9H1K1 167 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 SLC26A1Q9H2B4 701 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 DEF6Q9H4E7 631 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 XKR8Q9H6D3 395 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ASB8Q9H765 288 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 VPS37BQ9H9H4 285 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 GLOD4Q9HC38 313 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 SLC22A11Q9NSA0 550 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 SMOXQ9NWM0 555 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 PLA2G3Q9NZ20 509 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 AIPL1Q9NZN9 384 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 CHMP5Q9NZZ3 219 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 FAM153AQ9UHL3 310 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 ANAPC7Q9UJX3 599 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 NXT1Q9UKK6 140 aaKnown RBP4.98□□□□□ -1.61
SPG11-208ENST00000558155 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 HS3ST3B1Q9Y662 390 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 APCP25054 2843 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 CSMD1Q96PZ7 3565 aa4.98□□□□□ -1.61
SPG11-208ENST00000558155 HIVEP1P15822 2718 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 PDZD2O15018 2839 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 NCOA6Q14686 2063 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 NSG1A0A0A6YYJ2 146 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 A0A0A6YYK5 440 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 A0A0J9YY10 115 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 A0A1B0GX78 115 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 LRRC53A6NM62 1247 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 C2orf81A6NN90 581 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 ISM1B1AKI9 464 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 CFAP99D6REC4 459 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 DDX3XO00571 662 aaKnown RBP eCLIP4.97□□□□□ -1.61
SPG11-208ENST00000558155 MAP2K7O14733 419 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 PPP1R12AO14974 1030 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 SLC19A2O60779 497 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 UQCRHP07919 91 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 ICAM2P13598 275 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 ATP1B2P14415 290 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 ACPPP15309 386 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 UGT2B7P16662 529 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 ZFXP17010 805 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 KDELR1P24390 212 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 CXCR2P25025 360 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 MST1P26927 711 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 SHMT2P34897 504 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 GJC1P36383 396 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 PRKCIP41743 596 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 NSG1P42857 185 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 GABRA4P48169 554 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 RAB28P51157 221 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 WNT3AP56704 352 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 FOXL2P58012 376 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 AP2B1P63010 937 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 PPP2R2AP63151 447 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 CSNK1G2P78368 415 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 GUCA2AQ02747 115 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 OCA2Q04671 838 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 RPA4Q13156 261 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 PRKG2Q13237 762 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 ZIC1Q15915 447 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 C3AR1Q16581 482 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 DEFB110Q30KQ9 67 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 FAM214AQ32MH5 1076 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 ZC3H12BQ5HYM0 836 aaKnown RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 TCTE1Q5JU00 501 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 SIRPB2Q5JXA9 342 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 MEX3BQ6ZN04 569 aaKnown RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 UNC5AQ6ZN44 842 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 SHISA6Q6ZSJ9 500 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 BZW1Q7L1Q6 419 aaKnown RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 NDUFAF7Q7L592 441 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms