RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.17■□□□□ 0.18
NEK9-211ENST00000557673 GPR150Q8NGU9 434 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 CT55Q8WUE5 264 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 HEXDCQ8WVB3 486 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 RSC1A1Q92681 617 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 DCUN1D1Q96GG9 259 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 ACTL8Q9H568 366 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 PLAC1Q9HBJ0 212 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 ZDHHC18Q9NUE0 388 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 IL1RAPL1Q9NZN1 696 aa16.17■□□□□ 0.18
NEK9-211ENST00000557673 DNMT3AQ9Y6K1 912 aaPredicted RBP16.17■□□□□ 0.18
NEK9-211ENST00000557673 EIF3HO15372 352 aaKnown RBP eCLIP16.16■□□□□ 0.185e-7■□□□□ 11
NEK9-211ENST00000557673 SGTAO43765 313 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 KIF1CO43896 1103 aaKnown RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 RALBP11234 206 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 PRLHRP49683 370 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 ARL4DP49703 201 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 RPS15P62841 145 aaKnown RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 ACY1Q03154 408 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 PDIA2Q13087 525 aaKnown RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 TUBB3Q13509 450 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 RPE65Q16518 533 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 UGT8Q16880 541 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 TYSND1Q2T9J0 566 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 BCL7AQ4VC05 210 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 SPANXN3Q5MJ09 141 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 LYPLAL1Q5VWZ2 237 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 STEAP4Q687X5 459 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 CERS6Q6ZMG9 384 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 CENPUQ71F23 418 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 SIDT2Q8NBJ9 832 aaKnown RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 CPT1CQ8TCG5 803 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 SLC41A2Q96JW4 573 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 ZNF514Q96K75 400 aaPredicted RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 FAM129AQ9BZQ8 928 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 FAM114A2Q9NRY5 505 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 SEMA5BQ9P283 1151 aa16.16■□□□□ 0.18
NEK9-211ENST00000557673 PLEKHB1Q9UF11 243 aaPredicted RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 ZC3H7BQ9UGR2 993 aaKnown RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 PCDHGA9Q9Y5G4 932 aaKnown RBP16.16■□□□□ 0.18
NEK9-211ENST00000557673 MGAT4DA6NG13 374 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 GOLGA8KD6RF30 607 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 GOLGA8TH3BQL2 631 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 CD3EAPO15446 510 aaKnown RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 UTP20O75691 2785 aaKnown RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 OGNP20774 298 aaKnown RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 PTPN4P29074 926 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 TTPAP49638 278 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 LONRF1Q17RB8 773 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 HP1BP3Q5SSJ5 553 aaPredicted RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 ZNF470Q6ECI4 717 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 CAPRIN2Q6IMN6 1127 aaKnown RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 MRNIPQ6NTE8 343 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 DUS1LQ6P1R4 473 aaKnown RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 UNC5AQ6ZN44 842 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 SYVN1Q86TM6 617 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 KMT5CQ86Y97 462 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 ANKMY2Q8IV38 441 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 ZBED8Q8IZ13 594 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 OTUD6BQ8N6M0 293 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 FBXO36Q8NEA4 188 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 RNF31Q96EP0 1072 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 CFAP36Q96G28 342 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 SLC25A23Q9BV35 468 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 WWP1Q9H0M0 922 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 IMP3Q9NV31 184 aaKnown RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 CFAP20Q9Y6A4 193 aaKnown RBP16.15■□□□□ 0.18
NEK9-211ENST00000557673 FAM169AQ9Y6X4 670 aa16.15■□□□□ 0.18
NEK9-211ENST00000557673 ATP1B2P14415 290 aaPredicted RBP16.14■□□□□ 0.17
NEK9-211ENST00000557673 ECHS1P30084 290 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 NSG1P42857 185 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 METRNLQ641Q3 311 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 PWWP2BQ6NUJ5 590 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 NEPROQ6NW34 567 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 LDB1Q86U70 411 aaPredicted RBP16.14■□□□□ 0.17
NEK9-211ENST00000557673 KCNMB4Q86W47 210 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 CILP2Q8IUL8 1156 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 LILRA3Q8N6C8 439 aaPredicted RBP16.14■□□□□ 0.17
NEK9-211ENST00000557673 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
NEK9-211ENST00000557673 OR2L2Q8NH16 312 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 CD180Q99467 661 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 TTC1Q99614 292 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 SAYSD1Q9NPB0 183 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 ACSS2Q9NR19 701 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 C20orf96Q9NUD7 363 aaPredicted RBP16.14■□□□□ 0.17
NEK9-211ENST00000557673 CUEDC1Q9NWM3 386 aaPredicted RBP16.14■□□□□ 0.17
NEK9-211ENST00000557673 G3BP2Q9UN86 482 aaKnown RBP16.14■□□□□ 0.17
NEK9-211ENST00000557673 PCDHGB7Q9Y5F8 929 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 NBPF19A0A087WUL8 3843 aa16.14■□□□□ 0.17
NEK9-211ENST00000557673 IGHV5-51A0A0C4DH38 117 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 OR1I1O60431 355 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 DNAJB5O75953 348 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 AP2A2O94973 939 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 RHOXF2BP0C7M4 288 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 MTHFD1P11586 935 aaKnown RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 FOLR1P15328 257 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 GNLYP22749 145 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 VARSP26640 1264 aaKnown RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 PPARGP37231 505 aaPredicted RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 PPP1CAP62136 330 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms