RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 KIR2DS3Q14952 304 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 FASTKD3Q14CZ7 662 aaKnown RBP12.09□□□□□ -0.47
SLIRP-209ENST00000557342 KLHL38Q2WGJ6 581 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 ACSBG2Q5FVE4 666 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 TRMT10BQ6PF06 316 aaKnown RBP12.09□□□□□ -0.47
SLIRP-209ENST00000557342 SPESP1Q6UW49 350 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 ZFAND4Q86XD8 727 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 PPP1R3BQ86XI6 285 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 DTX1Q86Y01 620 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 RASGRP3Q8IV61 690 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 MMGT1Q8N4V1 131 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 OR2L8Q8NGY9 312 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 OR8K5Q8NH50 307 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 PMEPA1Q969W9 287 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 FCRL4Q96PJ5 515 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 GPR21Q99679 349 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 CTRCQ99895 268 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 LRRC1Q9BTT6 524 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 PITPNM3Q9BZ71 974 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 FANCEQ9HB96 536 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 PLAC1Q9HBJ0 212 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 APMAPQ9HDC9 416 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 FAM114A2Q9NRY5 505 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 TAS2R13Q9NYV9 303 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 MOCS1Q9NZB8 636 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 SPATA7Q9P0W8 599 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 ZFATQ9P243 1243 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 TRMT6Q9UJA5 497 aaKnown RBP12.09□□□□□ -0.47
SLIRP-209ENST00000557342 RARRES3Q9UL19 164 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 PLAGL1Q9UM63 463 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 BTRCQ9Y297 605 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 NFS1Q9Y697 457 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 SLC9B1P1A6NJY1 282 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 ISM1B1AKI9 464 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 PSIP1O75475 530 aaKnown RBP12.08□□□□□ -0.48
SLIRP-209ENST00000557342 F7P08709 466 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-209ENST00000557342 EBLN1P0CF75 366 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 UGT2B7P16662 529 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 GABRB3P28472 473 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 BDKRB1P46663 353 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 RGS4P49798 205 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 TUBB4BP68371 445 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 SLC7A5Q01650 507 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 TUBB3Q13509 450 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 MAP7Q14244 749 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 GRB7Q14451 532 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 SLC5A12Q1EHB4 618 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 COL28A1Q2UY09 1125 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
SLIRP-209ENST00000557342 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.48
SLIRP-209ENST00000557342 MANEAQ5SRI9 462 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 FAM45BPQ6NSW5 357 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 C19orf48Q6RUI8 117 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 SLC26A11Q86WA9 606 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 CEP112Q8N8E3 955 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 FBXO25Q8TCJ0 367 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 CD200R1Q8TD46 325 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 CDKL2Q92772 493 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 TRAPPC9Q96Q05 1148 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 OR2A14Q96R47 310 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 CCNL2Q96S94 520 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-209ENST00000557342 NDNQ99608 321 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 MENTQ9BUN1 341 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 FAM129AQ9BZQ8 928 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 TWSG1Q9GZX9 223 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 FGF21Q9NSA1 209 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 LNPEPQ9UIQ6 1025 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
SLIRP-209ENST00000557342 MED16Q9Y2X0 877 aa12.08□□□□□ -0.48
SLIRP-209ENST00000557342 TMEM184BQ9Y519 407 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-209ENST00000557342 A0A0J9YY10 115 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 ZNF839A8K0R7 811 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 ZBTB14O43829 449 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 RAD1O60671 282 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 SPAG6O75602 509 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 STK17BO94768 372 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 FKBP9O95302 570 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 MT-ND3P03897 115 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 MSL3P1P0C860 447 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 FOLR1P15328 257 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 ST6GAL1P15907 406 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 MAP4P27816 1152 aaKnown RBP12.07□□□□□ -0.48
SLIRP-209ENST00000557342 HSD17B2P37059 387 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
SLIRP-209ENST00000557342 CUL1Q13616 776 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 KCNAB1Q14722 419 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 FBXO38Q6PIJ6 1188 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 ZDHHC24Q6UX98 284 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 CEP128Q6ZU80 1094 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 CYS1Q717R9 158 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 CACNA2D3Q8IZS8 1091 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 NLGN4XQ8N0W4 816 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 IL22RA1Q8N6P7 574 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 GPATCH11Q8N954 259 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms