RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CATSPERZQ9NTU4 200 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 ANAPC5Q9UJX4 755 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 PLAGL1Q9UM63 463 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 SRPK3Q9UPE1 567 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 PLAAQ9Y263 795 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 MDC1Q14676 2089 aaKnown RBP13.68□□□□□ -0.22
SNX6-210ENST00000557341 HEATR5BQ9P2D3 2071 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 USP9XQ93008 2570 aaPredicted RBP13.68□□□□□ -0.22
SNX6-210ENST00000557341 DOCK10Q96BY6 2186 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 H3BMH7 237 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 ZSCAN9O15535 394 aaPredicted RBP13.67□□□□□ -0.22
SNX6-210ENST00000557341 APOA4P06727 396 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 TPBGLP0DKB5 382 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 PEBP1P30086 187 aaKnown RBP13.67□□□□□ -0.22
SNX6-210ENST00000557341 PKLRP30613 574 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 CCR7P32248 378 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 CD97P48960 835 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 TTPAP49638 278 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 RRADP55042 308 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 MLLT10P55197 1068 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 HSPA14Q0VDF9 509 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 TMED2Q15363 201 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 ZIC1Q15915 447 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 FAM69BQ5VUD6 431 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 RHBDD2Q6NTF9 364 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 MED25Q71SY5 747 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 DCUN1D3Q8IWE4 304 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 TMEM102Q8N9M5 508 aaPredicted RBP13.67□□□□□ -0.22
SNX6-210ENST00000557341 GLIS1Q8NBF1 620 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 PROKR1Q8TCW9 393 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 LKAAEAR1Q8TD35 194 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 IRAK4Q9NWZ3 460 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 CDYLQ9Y232 598 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 ZKSCAN5Q9Y2L8 839 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 PCDHGB7Q9Y5F8 929 aa13.67□□□□□ -0.22
SNX6-210ENST00000557341 RP1L1Q8IWN7 2480 aaPredicted RBP13.67□□□□□ -0.22
SNX6-210ENST00000557341 AP3B1O00203 1094 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 PRMT5O14744 637 aaPredicted RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 GPC4O75487 556 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 CEACAM4O75871 244 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 ZSCAN5DPP0CG00 497 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 RPL22P35268 128 aaKnown RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 GABRA4P48169 554 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 SESN2P58004 480 aaPredicted RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 BASP1P80723 227 aaKnown RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 UBAP2LQ14157 1087 aaKnown RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 SIX1Q15475 284 aaPredicted RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 CCNG2Q16589 344 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 PCID2Q5JVF3 399 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 TLDC1Q6P9B6 456 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 DRICH1Q6PGQ1 229 aaPredicted RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 UNC5DQ6UXZ4 953 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 C4orf22Q6V702 233 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 VRK3Q8IV63 474 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 SLC22A18Q96BI1 424 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 PANX3Q96QZ0 392 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 CARD6Q9BX69 1037 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 IL22Q9GZX6 179 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 TXLNGQ9NUQ3 528 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 NDOR1Q9UHB4 597 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 GPN3Q9UHW5 284 aaPredicted RBP13.66□□□□□ -0.22
SNX6-210ENST00000557341 GNPTGQ9UJJ9 305 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 ZNF451Q9Y4E5 1061 aa13.66□□□□□ -0.22
SNX6-210ENST00000557341 TTLL8A6PVC2 850 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 IQCF5A8MTL0 148 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 CD3EAPO15446 510 aaKnown RBP13.65□□□□□ -0.22
SNX6-210ENST00000557341 HCRTR1O43613 425 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 CD63P08962 238 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 MAGP20916 626 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 OTX2P32243 289 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 ATP1A4Q13733 1029 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 C1orf189Q5VU69 101 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 PTRHD1Q6GMV3 140 aaKnown RBP13.65□□□□□ -0.22
SNX6-210ENST00000557341 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 LDB1Q86U70 411 aaPredicted RBP13.65□□□□□ -0.22
SNX6-210ENST00000557341 HPS6Q86YV9 775 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 MPP5Q8N3R9 675 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 ZBTB2Q8N680 514 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 ZNF655Q8N720 491 aaPredicted RBP13.65□□□□□ -0.22
SNX6-210ENST00000557341 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 LINC01555Q8NAE3 123 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 FDCSPQ8NFU4 85 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 CFAP61Q8NHU2 1237 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 GSDMBQ8TAX9 411 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 MAIP1Q8WWC4 291 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 IP6K3Q96PC2 410 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 GBP5Q96PP8 586 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 NDC1Q9BTX1 674 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 MENTQ9BUN1 341 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 RAB11FIP5Q9BXF6 653 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 LZTFL1Q9NQ48 299 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 CHRAC1Q9NRG0 131 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 GPR83Q9NYM4 423 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 MARCH4Q9P2E8 410 aaPredicted RBP13.65□□□□□ -0.22
SNX6-210ENST00000557341 ANKMY1Q9P2S6 941 aa13.65□□□□□ -0.22
SNX6-210ENST00000557341 DHCR7Q9UBM7 475 aaKnown RBP13.65□□□□□ -0.22
SNX6-210ENST00000557341 PLCL2Q9UPR0 1127 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms