RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 VPS26AO75436 327 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 BANF1O75531 89 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 C1QL1O75973 258 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 STK17BO94768 372 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 IVDP26440 423 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 ATP5DP30049 168 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 RAB28P51157 221 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 KPNA2P52292 529 aaKnown RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 SH3BP2P78314 561 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 PDIA2Q13087 525 aaKnown RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 WHAMMP3Q1A5X7 153 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 HP1BP3Q5SSJ5 553 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 C8orf74Q6P047 294 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 GPR155Q7Z3F1 870 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 BPHLQ86WA6 291 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 VRK3Q8IV63 474 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 SPNS2Q8IVW8 549 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 CACNA2D3Q8IZS8 1091 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 NLGN4XQ8N0W4 816 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 NLGN4YQ8NFZ3 816 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-207ENST00000556831 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 KCNJ9Q92806 393 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 RAD51AP1Q96B01 352 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 SLC22A18Q96BI1 424 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 SLC41A2Q96JW4 573 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 APMAPQ9HDC9 416 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 ACTR10Q9NZ32 417 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 WHRNQ9P202 907 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 LNPEPQ9UIQ6 1025 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 CDC23Q9UJX2 597 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 SDK2Q58EX2 2172 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 DOPEY1Q5JWR5 2465 aa13.66□□□□□ -0.22
SLIRP-207ENST00000556831 AHCTF1Q8WYP5 2266 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 PABPN1LA6NDY0 278 aaKnown RBP13.65□□□□□ -0.22
SLIRP-207ENST00000556831 BTN3A3O00478 584 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 RAD51CO43502 376 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 RAD1O60671 282 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 S1PR4O95977 384 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 F7P08709 466 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-207ENST00000556831 CHRM5P08912 532 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-207ENST00000556831 EBLN1P0CF75 366 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 ERVK-10P10266 1014 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 MAP4P27816 1152 aaKnown RBP13.65□□□□□ -0.22
SLIRP-207ENST00000556831 PRDX3P30048 256 aaKnown RBP13.65□□□□□ -0.22
SLIRP-207ENST00000556831 MPP1Q00013 466 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 CAV1Q03135 178 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 VAC14Q08AM6 782 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 KIR2DS3Q14952 304 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 LRRC8EQ6NSJ5 796 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 SPESP1Q6UW49 350 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 UNC5AQ6ZN44 842 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 KIAA0408Q6ZU52 694 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 ANKMY2Q8IV38 441 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 ZBED8Q8IZ13 594 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 AGGF1Q8N302 714 aaeCLIP13.65□□□□□ -0.22
SLIRP-207ENST00000556831 ESX1Q8N693 406 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 OR8K5Q8NH50 307 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 EFHD1Q9BUP0 239 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 SLC7A5P2Q9GIP4 190 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 FGF21Q9NSA1 209 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 TRMT6Q9UJA5 497 aaKnown RBP13.65□□□□□ -0.22
SLIRP-207ENST00000556831 CDYLQ9Y232 598 aa13.65□□□□□ -0.22
SLIRP-207ENST00000556831 ATMQ13315 3056 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 SLC9B1P1A6NJY1 282 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 MT-ND3P03897 115 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 CATP04040 527 aaKnown RBP13.64□□□□□ -0.23
SLIRP-207ENST00000556831 CCNYL3P0C7X3 344 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 FGF5P12034 268 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 ENO3P13929 434 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-207ENST00000556831 PKLRP30613 574 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 BDKRB1P46663 353 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 CARSP49589 748 aaKnown RBP13.64□□□□□ -0.23
SLIRP-207ENST00000556831 RGS4P49798 205 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 TUBB4BP68371 445 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 MRPS25P82663 173 aaKnown RBP13.64□□□□□ -0.23
SLIRP-207ENST00000556831 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 KCNAB1Q14722 419 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLIRP-207ENST00000556831 ARHGAP40Q5TG30 622 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 VASH2Q86V25 355 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 TMEM126BQ8IUX1 230 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 PALM2Q8IXS6 379 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 ADGRF3Q8IZF5 1079 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 D2HGDHQ8N465 521 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 C2CD4AQ8NCU7 369 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-207ENST00000556831 FBXO36Q8NEA4 188 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 PYROXD1Q8WU10 500 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 TUBB2BQ9BVA1 445 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 SYTL2Q9HCH5 934 aa13.64□□□□□ -0.23
SLIRP-207ENST00000556831 INTS7Q9NVH2 962 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms