RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ITGA8P53708 1063 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 SRSF6Q13247 344 aaKnown RBP11.17□□□□□ -0.62
SLIRP-205ENST00000556310 CTBP1Q13363 440 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 MAP7Q14244 749 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 KCNAB1Q14722 419 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 HIF1AQ16665 826 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 BBS9Q3SYG4 887 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 ZNF789Q5FWF6 425 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 SPANXN3Q5MJ09 141 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 TMTC4Q5T4D3 741 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 ARHGAP40Q5TG30 622 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 SPESP1Q6UW49 350 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 SYT10Q6XYQ8 523 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 UNC5AQ6ZN44 842 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 KCNMB4Q86W47 210 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 BPHLQ86WA6 291 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-205ENST00000556310 PPP1R3BQ86XI6 285 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 NLGN4XQ8N0W4 816 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 IL22RA1Q8N6P7 574 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 SPATA4Q8NEY3 305 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 NLGN4YQ8NFZ3 816 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-205ENST00000556310 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-205ENST00000556310 LRRC39Q96DD0 335 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 PPM1MQ96MI6 270 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 ULBP3Q9BZM4 244 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 CCDC68Q9H2F9 335 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 PDE7BQ9NP56 450 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 FBXO6Q9NRD1 293 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-205ENST00000556310 FGF21Q9NSA1 209 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 SOHLH2Q9NX45 425 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 RALYQ9UKM9 306 aaKnown RBP11.17□□□□□ -0.62
SLIRP-205ENST00000556310 FBXO5Q9UKT4 447 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 RARRES3Q9UL19 164 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 COMMD10Q9Y6G5 202 aa11.17□□□□□ -0.62
SLIRP-205ENST00000556310 FAM187AA6NFU0 413 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 SLC9B1P1A6NJY1 282 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 TP73O15350 636 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 EFSO43281 561 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 CHRM5P08912 532 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-205ENST00000556310 MSL3P1P0C860 447 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 ST6GAL1P15907 406 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 UGT2B7P16662 529 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 CHRM3P20309 590 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 MAP4P27816 1152 aaKnown RBP11.16□□□□□ -0.62
SLIRP-205ENST00000556310 ARL4CP56559 192 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 TUBB4BP68371 445 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 MPP1Q00013 466 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 ABHD18Q0P651 414 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 ABRQ12979 859 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 TUBB2AQ13885 445 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 GRB7Q14451 532 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 KYNUQ16719 465 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 HSP90AA5PQ58FG0 334 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 FBXO38Q6PIJ6 1188 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 TIPARPQ7Z3E1 657 aaKnown RBP11.16□□□□□ -0.62
SLIRP-205ENST00000556310 RASGRP3Q8IV61 690 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 UNC5BQ8IZJ1 945 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 ZBTB2Q8N680 514 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 ESX1Q8N693 406 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 OR8K5Q8NH50 307 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 CFAP61Q8NHU2 1237 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 KCNJ9Q92806 393 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 FAM136AQ96C01 138 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 CERS2Q96G23 380 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 ELMO2Q96JJ3 720 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 FOPNLQ96NB1 174 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 FCRL4Q96PJ5 515 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 UBL7Q96S82 380 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-205ENST00000556310 WDR83Q9BRX9 315 aaKnown RBP11.16□□□□□ -0.62
SLIRP-205ENST00000556310 MENTQ9BUN1 341 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 TUBB2BQ9BVA1 445 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 RAB11FIP5Q9BXF6 653 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 TRIM31Q9BZY9 425 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 FANCEQ9HB96 536 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 SYTL2Q9HCH5 934 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 LATS2Q9NRM7 1088 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 KLHL42Q9P2K6 505 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 PLAGL1Q9UM63 463 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 KALRNO60229 2985 aa11.16□□□□□ -0.62
SLIRP-205ENST00000556310 SMG1Q96Q15 3661 aaKnown RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 A0A0J9YY10 115 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 SPAG6O75602 509 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 KIAA0754O94854 1291 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 TIAF1O95411 115 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 C1orf105O95561 183 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 F12P00748 615 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 F7P08709 466 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ERVK-10P10266 1014 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 LIFP15018 202 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ZNF28P17035 718 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 PEBP1P30086 187 aaKnown RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 CCNFP41002 786 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 ELK3P41970 407 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 STAT5AP42229 794 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 RPL21P46778 160 aaKnown RBP11.15□□□□□ -0.62
SLIRP-205ENST00000556310 CLCN7P51798 805 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 RHDQ02161 417 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 KIR2DS3Q14952 304 aa11.15□□□□□ -0.62
SLIRP-205ENST00000556310 GPR19Q15760 415 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms