RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
PCNX4-209ENST00000555569 TP53TG5Q9Y2B4 290 aa13.34□□□□□ -0.27
PCNX4-209ENST00000555569 ANKRD12Q6UB98 2062 aa13.33□□□□□ -0.27
PCNX4-209ENST00000555569 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
PCNX4-209ENST00000555569 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 ZNF749O43361 778 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 NDUFS3O75489 264 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 SLCO2B1O94956 709 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 HBQ1P09105 142 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 NR1D1P20393 614 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 RPS3P23396 243 aaKnown RBP eCLIP13.33□□□□□ -0.28
PCNX4-209ENST00000555569 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.28
PCNX4-209ENST00000555569 PKLRP30613 574 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 VPS41P49754 854 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 RAB28P51157 221 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 TLE1Q04724 770 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 KIR2DS3Q14952 304 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 TRIP13Q15645 432 aaPredicted RBP13.33□□□□□ -0.28
PCNX4-209ENST00000555569 ZIC1Q15915 447 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 KCTD19Q17RG1 926 aaPredicted RBP13.33□□□□□ -0.28
PCNX4-209ENST00000555569 SLC5A12Q1EHB4 618 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 DEFB110Q30KQ9 67 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 TCTN3Q6NUS6 607 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 FAM198BQ6UWH4 519 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 CES3Q6UWW8 571 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 UNC5DQ6UXZ4 953 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 LRRC6Q86X45 466 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 DCUN1D3Q8IWE4 304 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 OTUD6BQ8N6M0 293 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 ENDOVQ8N8Q3 282 aaKnown RBP13.33□□□□□ -0.28
PCNX4-209ENST00000555569 MFSD3Q96ES6 412 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 NLNQ9BYT8 704 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 CHRNA10Q9GZZ6 450 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 P2RY12Q9H244 342 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 SOX13Q9UN79 622 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 SNX7Q9UNH6 387 aa13.33□□□□□ -0.28
PCNX4-209ENST00000555569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
PCNX4-209ENST00000555569 KPNA5O15131 536 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 OR2B3O76000 313 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 VAPBO95292 243 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 CAPN1P07384 714 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 ARNTP27540 789 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 CASRP41180 1078 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 GABRA4P48169 554 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 TERF1P54274 439 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 SARNPP82979 210 aaKnown RBP13.32□□□□□ -0.28
PCNX4-209ENST00000555569 GPS1Q13098 491 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 KCNJ11Q14654 390 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 PTCHD3Q3KNS1 767 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 SDCCAG8Q86SQ7 713 aaPredicted RBP13.32□□□□□ -0.28
PCNX4-209ENST00000555569 GSDMBQ8TAX9 411 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 PBKQ96KB5 322 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 DPH2Q9BQC3 489 aaPredicted RBP13.32□□□□□ -0.28
PCNX4-209ENST00000555569 MENTQ9BUN1 341 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 TRIM55Q9BYV6 548 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 EPN3Q9H201 632 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 ASH1LQ9NR48 2969 aaKnown RBP13.32□□□□□ -0.28
PCNX4-209ENST00000555569 TCFL5Q9UL49 500 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 AP1M2Q9Y6Q5 423 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 SETXQ7Z333 2677 aaKnown RBP13.32□□□□□ -0.28
PCNX4-209ENST00000555569 PCM1Q15154 2024 aa13.32□□□□□ -0.28
PCNX4-209ENST00000555569 C9J4A7 227 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 H3BMH7 237 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 K7EM74 188 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 HCRTR1O43613 425 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 DNAJB5O75953 348 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 KRT14P02533 472 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 AGXTP21549 392 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 MAGEA6P43360 314 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 EIF3BP55884 814 aaKnown RBP13.31□□□□□ -0.28
PCNX4-209ENST00000555569 KLRB1Q12918 225 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 GRB7Q14451 532 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 NCF4Q15080 339 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 ZNF385CQ66K41 422 aaPredicted RBP13.31□□□□□ -0.28
PCNX4-209ENST00000555569 CPZQ66K79 652 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 KIAA0930Q6ICG6 404 aaPredicted RBP13.31□□□□□ -0.28
PCNX4-209ENST00000555569 TTC27Q6P3X3 843 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 TTC23LQ6PF05 361 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 ASB18Q6ZVZ8 466 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 OTOAQ7RTW8 1153 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 RASGEF1CQ8N431 466 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 DNAJC22Q8N4W6 341 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 C2orf73Q8N5S3 287 aaPredicted RBP13.31□□□□□ -0.28
PCNX4-209ENST00000555569 LMNTD1Q8N9Z9 388 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 LINC01555Q8NAE3 123 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 OR2L8Q8NGY9 312 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 ADAMTS17Q8TE56 1095 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 MAGOHBQ96A72 148 aaKnown RBP13.31□□□□□ -0.28
PCNX4-209ENST00000555569 SLC22A18Q96BI1 424 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 IL17FQ96PD4 163 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 SPRTNQ9H040 489 aaPredicted RBP13.31□□□□□ -0.28
PCNX4-209ENST00000555569 CIDEBQ9UHD4 219 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 JRKLQ9Y4A0 524 aa13.31□□□□□ -0.28
PCNX4-209ENST00000555569 ARGFXA6NJG6 315 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 GOLGA8KD6RF30 607 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 GOLGA8TH3BQL2 631 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 RASGRF2O14827 1237 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 PFDN6O15212 129 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 ZSCAN9O15535 394 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms