RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 GOLGA6L10A0A0M3HER8 536 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 TCRBV7S3A2A0A539 114 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 SDR42E2A6NKP2 422 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 TMEM150CB9EJG8 249 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 E7EQ34 232 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 H3BMH7 237 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 SLC28A2O43868 658 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 KIF5CO60282 957 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 S1PR4O95977 384 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 CD9P21926 228 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 COILP38432 576 aaPredicted RBP11.43□□□□□ -0.58
VRK1-204ENST00000555351 MAGEA3P43357 314 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 GABRA4P48169 554 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 PMS2P54278 862 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 ABRQ12979 859 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 GBX1Q14549 363 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 C16orf46Q6P387 395 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 TLDC1Q6P9B6 456 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 FBXO38Q6PIJ6 1188 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 CCDC137Q6PK04 289 aaKnown RBP11.43□□□□□ -0.58
VRK1-204ENST00000555351 CDHR3Q6ZTQ4 885 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 TMEM135Q86UB9 458 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 VRK3Q8IV63 474 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 SLC38A9Q8NBW4 561 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 OR2L8Q8NGY9 312 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 C9orf43Q8TAL5 461 aaPredicted RBP11.43□□□□□ -0.58
VRK1-204ENST00000555351 HMGCLL1Q8TB92 370 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 MAGEC3Q8TD91 643 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 DENND1AQ8TEH3 1009 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 LPGAT1Q92604 370 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 MR1Q95460 341 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 RAD51AP1Q96B01 352 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 CLIP3Q96DZ5 547 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 BIRC8Q96P09 236 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 OSBPL9Q96SU4 736 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 DHRS4Q9BTZ2 278 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 PCMTD2Q9NV79 361 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 SAMD15Q9P1V8 674 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 ANAPC2Q9UJX6 822 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 SRPK3Q9UPE1 567 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 KLK4Q9Y5K2 254 aa11.43□□□□□ -0.58
VRK1-204ENST00000555351 TLN1Q9Y490 2541 aaKnown RBP11.42□□□□□ -0.58
VRK1-204ENST00000555351 MKRN2OSH3BPM6 223 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 RASGRF2O14827 1237 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 PHF2O75151 1096 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 FURINP09958 794 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 PVRP15151 417 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 AGXTP21549 392 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 ERV3-1Q14264 604 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 GRB7Q14451 532 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 NAA25Q14CX7 972 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 TRIP13Q15645 432 aaPredicted RBP11.42□□□□□ -0.58
VRK1-204ENST00000555351 ZNF385CQ66K41 422 aaPredicted RBP11.42□□□□□ -0.58
VRK1-204ENST00000555351 RHBDD2Q6NTF9 364 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 TCTN3Q6NUS6 607 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 NEPROQ6NW34 567 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 NAPRTQ6XQN6 538 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 LDB1Q86U70 411 aaPredicted RBP11.42□□□□□ -0.58
VRK1-204ENST00000555351 CILP2Q8IUL8 1156 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 SYTL1Q8IYJ3 562 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 DNAJC22Q8N4W6 341 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 LINC01555Q8NAE3 123 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 PROKR1Q8TCW9 393 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 LKAAEAR1Q8TD35 194 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 N4BP2L2Q92802 583 aaPredicted RBP11.42□□□□□ -0.58
VRK1-204ENST00000555351 SLCO2A1Q92959 643 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 FOPNLQ96NB1 174 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 CHST8Q9H2A9 424 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 AKIRIN1Q9H9L7 192 aaPredicted RBP11.42□□□□□ -0.58
VRK1-204ENST00000555351 INTS7Q9NVH2 962 aaKnown RBP11.42□□□□□ -0.58
VRK1-204ENST00000555351 SPHK1Q9NYA1 384 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 SNX12Q9UMY4 172 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 PLCL2Q9UPR0 1127 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 MAN2B2Q9Y2E5 1009 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 COMMD10Q9Y6G5 202 aa11.42□□□□□ -0.58
VRK1-204ENST00000555351 CDC14CA4D256 554 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 IQCF5A8MTL0 148 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 ISM1B1AKI9 464 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 TARM1B6A8C7 271 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 ZNF749O43361 778 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 PRICKLE3O43900 615 aaPredicted RBP11.41□□□□□ -0.58
VRK1-204ENST00000555351 RFPL1O75677 317 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 OR2B3O76000 313 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 USP1O94782 785 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 TMEM63AO94886 807 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 MATN4O95460 622 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 C1orf105O95561 183 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 CAPN1P07384 714 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
VRK1-204ENST00000555351 PEBP1P30086 187 aaKnown RBP11.41□□□□□ -0.58
VRK1-204ENST00000555351 EIF3BP55884 814 aaKnown RBP11.41□□□□□ -0.58
VRK1-204ENST00000555351 ZIC1Q15915 447 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 ANKRD20A4Q4UJ75 823 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 CTSL3PQ5NE16 218 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 YOD1Q5VVQ6 348 aaPredicted RBP11.41□□□□□ -0.58
VRK1-204ENST00000555351 ANKRD22Q5VYY1 191 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 FAM199XQ6PEV8 388 aaPredicted RBP11.41□□□□□ -0.58
VRK1-204ENST00000555351 NEK10Q6ZWH5 1172 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 PPIL6Q8IXY8 311 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms