RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 EBLN1P0CF75 366 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 ST6GAL1P15907 406 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 UGT2B7P16662 529 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 ZNF28P17035 718 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 NELFEP18615 380 aaKnown RBP11.96□□□□□ -0.49
SYNE2-214ENST00000554928 PRDX3P30048 256 aaKnown RBP11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TSPAN7P41732 249 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 ERVPABLB-1P60509 514 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 FASTKQ14296 549 aaKnown RBP11.96□□□□□ -0.49
SYNE2-214ENST00000554928 ZNF460Q14592 562 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 ZIC1Q15915 447 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 HECTD2Q5U5R9 776 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 KLHL35Q6PF15 583 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 C19orf48Q6RUI8 117 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 PAQR3Q6TCH7 311 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TMEM207Q6UWW9 146 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 KIAA0408Q6ZU52 694 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 STRA8Q7Z7C7 330 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 RASGRP3Q8IV61 690 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 DCUN1D3Q8IWE4 304 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 PALM2Q8IXS6 379 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 MNS1Q8NEH6 495 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 IFT81Q8WYA0 676 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 DLG3Q92796 817 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 INPP5DQ92835 1189 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 SLC41A2Q96JW4 573 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 OR2A14Q96R47 310 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TAAR9Q96RI9 348 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 CCDC68Q9H2F9 335 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 AKAP7Q9P0M2 348 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-214ENST00000554928 ZFATQ9P243 1243 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 POLG2Q9UHN1 485 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 IKZF3Q9UKT9 509 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 KLHL20Q9Y2M5 609 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 PCDHGA7Q9Y5G6 932 aa11.96□□□□□ -0.49
SYNE2-214ENST00000554928 TEX51A0A1B0GUA7 166 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 FAM159BA6NKW6 160 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 NVLO15381 856 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 HCRTR1O43613 425 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 VPS26AO75436 327 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 PSIP1O75475 530 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 FAM155BO75949 473 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 TIAF1O95411 115 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 TSPAN12O95859 305 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 CTSBP07858 339 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 FDXRP22570 491 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 PSMB5P28074 263 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 ATP5DP30049 168 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 SHMT2P34897 504 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 GMPRP36959 345 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 PCBP4P57723 403 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 YBX1P67809 324 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 CAV1Q03135 178 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 FOXM1Q08050 763 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 CLN3Q13286 438 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 GPR19Q15760 415 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 ARMC6Q6NXE6 501 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 C3orf62Q6ZUJ4 267 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 GALNT7Q86SF2 657 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 ZC3HC1Q86WB0 502 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 SPACA3Q8IXA5 215 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 EEF1AKMT1Q8WVE0 214 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 HNRNPLLQ8WVV9 542 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 TRAPPC9Q96Q05 1148 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 OR6C1Q96RD1 312 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 FAM60AQ9NP50 221 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 NINJ2Q9NZG7 142 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 TRMT6Q9UJA5 497 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 ADAMTS6Q9UKP5 1117 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 COMMD10Q9Y6G5 202 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 URB1O60287 2271 aaKnown RBP11.95□□□□□ -0.5
SYNE2-214ENST00000554928 ADAMTS20P59510 1910 aa11.95□□□□□ -0.5
SYNE2-214ENST00000554928 CFAP47Q6ZTR5 3102 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 A0A087WV48 116 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 A0A1W2PPV9 198 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PIPSLA2A3N6 862 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 RASGRF2O14827 1237 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 TOX3O15405 576 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-214ENST00000554928 NRP2O60462 931 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 KRT37O76014 449 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 RHOXF2BP0C7M4 288 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 WT1P19544 449 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-214ENST00000554928 SAT1P21673 171 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 CD9P21926 228 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 CDH3P22223 829 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 MLLT3P42568 568 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-214ENST00000554928 RAB28P51157 221 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 TAS2R39P59534 338 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PRKAA1Q13131 559 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 KBTBD12Q3ZCT8 623 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PRAMEF17Q5VTA0 474 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 SPESP1Q6UW49 350 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 MBOAT1Q6ZNC8 495 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 TIPARPQ7Z3E1 657 aaKnown RBP11.94□□□□□ -0.5
SYNE2-214ENST00000554928 CEP97Q8IW35 865 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 D2HGDHQ8N465 521 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 CEP112Q8N8E3 955 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 FBF1Q8TES7 1133 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms