RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 Q6ZSR9 355 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 MMAAQ8IVH4 418 aaKnown RBP11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ETFBKMTQ8IXQ9 262 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 SFRP1Q8N474 314 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 EME1Q96AY2 570 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 AP2M1Q96CW1 435 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ZNF382Q96SR6 550 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 C1QTNF3Q9BXJ4 246 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 PLA2G2FQ9BZM2 168 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 KCTD5Q9NXV2 234 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 KLQ9UEF7 1012 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 PSMD13Q9UNM6 376 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 MYO15AQ9UKN7 3530 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 DOCK9Q9BZ29 2069 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 NUMA1Q14980 2115 aa11.42□□□□□ -0.58
SHMT2-212ENST00000554467 ZNF106Q9H2Y7 1883 aaKnown RBP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SLC22A2O15244 555 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 CYP2A6P11509 494 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 MSH3P20585 1137 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 ITPKAP23677 461 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 AOAHP28039 575 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 GGT5P36269 586 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 ACADVLP49748 655 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SLC7A2P52569 658 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 STX5Q13190 355 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SPIDRQ14159 915 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 NR6A1Q15406 480 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 TTLL9Q3SXZ7 439 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SAMD11Q96NU1 681 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 RPP25Q9BUL9 199 aaKnown RBP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 ATG2AQ2TAZ0 1938 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 PRORSD1PA6NEY8 169 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SOBPA7XYQ1 873 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 TSPAN6O43657 245 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SGTAO43765 313 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 HMOX2P30519 316 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 ADSLP30566 484 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 ZNF234Q14588 700 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 PCBP2Q15366 365 aaKnown RBP eCLIP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 CPSF6Q16630 551 aaKnown RBP eCLIP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SMUG1Q53HV7 270 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 C6orf136Q5SQH8 315 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 C6orf183Q5T699 404 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 LIPIQ6XZB0 460 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 CENPSQ8N2Z9 138 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 RNF175Q8N4F7 328 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 PDPRQ8NCN5 879 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 TSPAN14Q8NG11 270 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 ARRDC3Q96B67 414 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 P2RY13Q9BPV8 354 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 CD244Q9BZW8 370 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 PIF1Q9H611 641 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 ZFP14Q9HCL3 533 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 TRNAU1APQ9NX07 287 aaKnown RBP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SNX13Q9Y5W8 968 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 DOCK8Q8NF50 2099 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 C7orf72A4D263 438 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SPINT1O43278 529 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 MMP20O60882 483 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 CD247P20963 164 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 MMP12P39900 470 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SOX9P48436 509 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 NEK2P51955 445 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 TIGD2Q4W5G0 525 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 THOC7Q6I9Y2 204 aaKnown RBP11.41□□□□□ -0.58
SHMT2-212ENST00000554467 RTL10Q7L3V2 364 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 RASGEF1AQ8N9B8 481 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 CHFRQ96EP1 664 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 DCUN1D5Q9BTE7 237 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 SLC25A23Q9BV35 468 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 MAP10Q9P2G4 905 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 DPP7Q9UHL4 492 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 GPR45Q9Y5Y3 372 aa11.41□□□□□ -0.58
SHMT2-212ENST00000554467 HOXC11O43248 304 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 STAMBPO95630 424 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 INHBBP09529 407 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 OCM2P0CE71 109 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 OCMP0CE72 109 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 ME2P23368 584 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 CDH15P55291 814 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 KCNC4Q03721 635 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 CLPPQ16740 277 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 CCSMST1Q4G0I0 132 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 RFTN2Q52LD8 501 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 XKR7Q5GH72 579 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 C9orf64Q5T6V5 341 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 HENMT1Q5T8I9 393 aaKnown RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 VITQ6UXI7 678 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 PKP2Q99959 881 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 FAM83CQ9BQN1 747 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 PAIP1Q9H074 479 aaKnown RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 SFXN1Q9H9B4 322 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 C6orf203Q9P0P8 240 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 PADI4Q9UM07 663 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 PRPF19Q9UMS4 504 aaKnown RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 PRKAB1Q9Y478 270 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 POLR3HQ9Y535 204 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms