RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C6orf203Q9P0P8 240 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-208ENST00000551338 GULP1Q9UBP9 304 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 FADS3Q9Y5Q0 445 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 TCRBV3S1A0A5B6 114 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 SERTM1A2A2V5 107 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 DYTNA2CJ06 578 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 ARNTLO00327 626 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 NPC1O15118 1278 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 ULK1O75385 1050 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 PDYNP01213 254 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 KRT6AP02538 564 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 KRT6BP04259 564 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 HSD17B1P14061 328 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 SLC2A4P14672 509 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 PSMC3P17980 439 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 VARSP26640 1264 aaKnown RBP11.21□□□□□ -0.61
RAB5C-208ENST00000551338 GDI1P31150 447 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 DRD3P35462 400 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 GNPDA1P46926 289 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 KRT6CP48668 564 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 PRKG2Q13237 762 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 MAD2L1Q13257 205 aaPredicted RBP11.21□□□□□ -0.61
RAB5C-208ENST00000551338 ENPP2Q13822 863 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 TRIP10Q15642 601 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 CPSF6Q16630 551 aaKnown RBP eCLIP11.21□□□□□ -0.61
RAB5C-208ENST00000551338 IMPG1Q17R60 797 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 AAK1Q2M2I8 961 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 ANO7Q6IWH7 933 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 SLC2A7Q6PXP3 512 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 PARM1Q6UWI2 310 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 SUSD1Q6UWL2 747 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 DSG4Q86SJ6 1040 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 PDSS2Q86YH6 399 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 LILRA2Q8N149 483 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 DPP10Q8N608 796 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 NUDT8Q8WV74 236 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 SELENOMQ8WWX9 145 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 ELSPBP1Q96BH3 223 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 HDAC8Q9BY41 377 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 ZCCHC2Q9C0B9 1178 aaKnown RBP11.21□□□□□ -0.61
RAB5C-208ENST00000551338 SLC28A3Q9HAS3 691 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 INTS7Q9NVH2 962 aaKnown RBP11.21□□□□□ -0.61
RAB5C-208ENST00000551338 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
RAB5C-208ENST00000551338 ATXN10Q9UBB4 475 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 SLC22A14Q9Y267 594 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 NEUROG3Q9Y4Z2 214 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 STON1Q9Y6Q2 735 aa11.21□□□□□ -0.61
RAB5C-208ENST00000551338 MYO9BQ13459 2157 aa11.21□□□□□ -0.62
RAB5C-208ENST00000551338 PLXND1Q9Y4D7 1925 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 NPIPB8E9PQR5 432 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 LIN7AO14910 233 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 PEX1O43933 1283 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 CATP04040 527 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 APODP05090 189 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 LAMP2P13473 410 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 JUPP14923 745 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 CD22P20273 847 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 PRPH2P23942 346 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 IMPA1P29218 277 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 PDHA2P29803 388 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 GRIA2P42262 883 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 WASP42768 502 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 GSK3BP49841 420 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 EEFSECP57772 596 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 RHDQ02161 417 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 BNIP2Q12982 314 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 CHIT1Q13231 466 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 ADAM15Q13444 863 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 GTF2H3Q13889 308 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 PLA2G4EQ3MJ16 856 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 SPATS1Q496A3 300 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 USP39Q53GS9 565 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 C2orf27AQ580R0 203 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 RABL3Q5HYI8 236 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 HABP4Q5JVS0 413 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 LCN8Q6JVE9 175 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 AGTRAPQ6RW13 159 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 THOC6Q86W42 341 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 KIAA2013Q8IYS2 634 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 LIX1Q8N485 282 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 TMEM102Q8N9M5 508 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 FBXO15Q8NCQ5 510 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 CXorf40AQ8TE69 158 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 FGF14Q92915 247 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 RAB7BQ96AH8 199 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 ZUFSPQ96AP4 578 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 MTFMTQ96DP5 389 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 CCDC138Q96M89 665 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 PKP4Q99569 1192 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 PKP2Q99959 881 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 RPP25Q9BUL9 199 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 TRIM8Q9BZR9 551 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 KLHL4Q9C0H6 718 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 OR2AG1Q9H205 316 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 S1PR5Q9H228 398 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms