RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 VPS50Q96JG6 964 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 GBP5Q96PP8 586 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 P4HTMQ9NXG6 502 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 AMFRQ9UKV5 643 aa22.26■■□□□ 1.15
SMARCD1-209ENST00000550477 ATXN8OSP0DMR3 200 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 ALAS2P22557 587 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 ACADLP28330 430 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 DEFB110Q30KQ9 67 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 NKAIN1Q4KMZ8 207 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 PRR30Q53SZ7 412 aaPredicted RBP22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 IRAK1BP1Q5VVH5 260 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 IGFL3Q6UXB1 125 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 PIANPQ8IYJ0 282 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 DNAAF3Q8N9W5 541 aa22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 SNRNP40Q96DI7 357 aaKnown RBP22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 INTS7Q9NVH2 962 aaKnown RBP22.25■■□□□ 1.15
SMARCD1-209ENST00000550477 CCDC88CQ9P219 2028 aa22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 ANKRD12Q6UB98 2062 aa22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 BTNL10A8MVZ5 291 aa22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 DNAJC21Q5F1R6 531 aaKnown RBP22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 TXLNBQ8N3L3 684 aa22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 CISD2Q8N5K1 135 aaKnown RBP22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 PANX2Q96RD6 677 aa22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 NRTNQ99748 197 aa22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 DHCR7Q9UBM7 475 aaKnown RBP22.24■■□□□ 1.15
SMARCD1-209ENST00000550477 ERI2A8K979 691 aaKnown RBP22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 METTL18O95568 372 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 PRSS56P0CW18 603 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 GLRBP48167 497 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 CDH17Q12864 832 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 AIMP2Q13155 320 aaKnown RBP22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 NR6A1Q15406 480 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 ZIC1Q15915 447 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 TTC23LQ6PF05 361 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 PEX26Q7Z412 305 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 SYCE1Q8N0S2 351 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 C5orf34Q96MH7 638 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 ZNF552Q9H707 407 aaPredicted RBP22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 AGPAT4Q9NRZ5 378 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 SPHK1Q9NYA1 384 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 SLC5A6Q9Y289 635 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 COPG1Q9Y678 874 aaKnown RBP22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 PRSS21Q9Y6M0 314 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 NOTCH2Q04721 2471 aa22.23■■□□□ 1.15
SMARCD1-209ENST00000550477 SLC5A10A0PJK1 596 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 A1L4Q6 167 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 HEATR9A2RTY3 570 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 MROH6A6NGR9 719 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 MIF4GDA9UHW6 222 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 AGPSO00116 658 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 GABRA4P48169 554 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 RAB28P51157 221 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 SOX8P57073 446 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 ZC3H12BQ5HYM0 836 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 HIST2H2BCQ6DN03 193 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 MRPL14Q6P1L8 145 aaKnown RBP22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 DNAJC22Q8N4W6 341 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 ALG3Q92685 438 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 C19orf60Q96EN9 201 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 MRFAP1L1Q96HT8 127 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 ASF1BQ9NVP2 202 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 EURLQ9NYK6 297 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 CDYLQ9Y232 598 aa22.22■■□□□ 1.15
SMARCD1-209ENST00000550477 ANKUB1A6NFN9 424 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 H3BMH7 237 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 KRT86O43790 486 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 CBX6O95503 412 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 PSMA3P25788 255 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 ITGA3P26006 1051 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 STIP1P31948 543 aaKnown RBP22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 SLC9A5Q14940 896 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 AADACL2Q6P093 401 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 AFTPHQ6ULP2 937 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 MAMDC2Q7Z304 686 aaPredicted RBP22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 KIAA1328Q86T90 577 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 GSDMBQ8TAX9 411 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 COG1Q8WTW3 980 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 ASZ1Q8WWH4 475 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 TMEM121Q9BTD3 319 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 PIH1D1Q9NWS0 290 aaKnown RBP22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 IMPACTQ9P2X3 320 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 ANAPC5Q9UJX4 755 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 MRFAP1Q9Y605 127 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 DUSP10Q9Y6W6 482 aa22.21■■□□□ 1.15
SMARCD1-209ENST00000550477 HIVEP3Q5T1R4 2406 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 SOWAHDA6NJG2 315 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 BHMG1C9JSJ3 638 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 ALBP02768 609 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 APOA4P06727 396 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 ITGAXP20702 1163 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 FOXN2P32314 431 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 FASTKD1Q53R41 847 aaKnown RBP22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 YOD1Q5VVQ6 348 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 PPP1R21Q6ZMI0 780 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 TTLL10Q6ZVT0 673 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 NLRP9Q7RTR0 991 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 FKBP10Q96AY3 582 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 IL1RAPL1Q9NZN1 696 aa22.2■■□□□ 1.14
SMARCD1-209ENST00000550477 PLAGL1Q9UM63 463 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms