RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 Q6ZS92 163 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 TRIM73Q86UV7 250 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 ZNF655Q8N720 491 aaPredicted RBP13.09□□□□□ -0.31
TROAP-211ENST00000549891 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 OR5K2Q8NHB8 316 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 STYXQ8WUJ0 223 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 ELMO1Q92556 727 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 NRTNQ99748 197 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 OSBPL8Q9BZF1 889 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 SPRTNQ9H040 489 aaPredicted RBP13.09□□□□□ -0.31
TROAP-211ENST00000549891 SMARCAL1Q9NZC9 954 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 DHCR7Q9UBM7 475 aaKnown RBP13.09□□□□□ -0.31
TROAP-211ENST00000549891 PLCL2Q9UPR0 1127 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 TDRKHQ9Y2W6 561 aaKnown RBP13.09□□□□□ -0.31
TROAP-211ENST00000549891 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
TROAP-211ENST00000549891 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 AP2A1O95782 977 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 PIM1P11309 404 aaPredicted RBP13.08□□□□□ -0.32
TROAP-211ENST00000549891 GABRA4P48169 554 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 ARSFP54793 590 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 ITIH4Q14624 930 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 SLC9A5Q14940 896 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 ZIC1Q15915 447 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 DBN1Q16643 649 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 PARP6Q2NL67 630 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 IRAK1BP1Q5VVH5 260 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 ZNF787Q6DD87 383 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 MRPL14Q6P1L8 145 aaKnown RBP13.08□□□□□ -0.32
TROAP-211ENST00000549891 PACS1Q6VY07 963 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 PPP1R32Q7Z5V6 425 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 KLHDC8BQ8IXV7 354 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 CCDC170Q8IYT3 715 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 UBE2Q2Q8WVN8 375 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 FKBP10Q96AY3 582 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 CDKN2AIPNLQ96HQ2 116 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 VPS50Q96JG6 964 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 TTC1Q99614 292 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 WDR77Q9BQA1 342 aaPredicted RBP13.08□□□□□ -0.32
TROAP-211ENST00000549891 LRRC40Q9H9A6 602 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 CDYLQ9Y232 598 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 PCDHA13Q9Y5I0 950 aa13.08□□□□□ -0.32
TROAP-211ENST00000549891 DIDO1Q9BTC0 2240 aaKnown RBP13.07□□□□□ -0.32
TROAP-211ENST00000549891 ISM1B1AKI9 464 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 PSMD3O43242 534 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 PTMAP06454 111 aaKnown RBP13.07□□□□□ -0.32
TROAP-211ENST00000549891 OR56A5P0C7T3 313 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 ALAS2P22557 587 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 ITGA3P26006 1051 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 COL8A1P27658 744 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 ACADLP28330 430 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 RWDD2BP57060 319 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 POU6F1Q14863 301 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 BRD3Q15059 726 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 P3H1Q32P28 736 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 CRB2Q5IJ48 1285 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 PIANPQ8IYJ0 282 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 DNAJC22Q8N4W6 341 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 ST6GALNAC3Q8NDV1 305 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 FLVCR1-AS1Q8TAF5 88 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 PPP4R1Q8TF05 950 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 SLC22A18Q96BI1 424 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 BARD1Q99728 777 aaKnown RBP13.07□□□□□ -0.32
TROAP-211ENST00000549891 WDR54Q9H977 334 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 SPHK1Q9NYA1 384 aa13.07□□□□□ -0.32
TROAP-211ENST00000549891 POLEQ07864 2286 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 CNTRLQ7Z7A1 2325 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 ZGRF1Q86YA3 2104 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 HCRTR1O43613 425 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 ALBP02768 609 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 RPN2P04844 631 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 UMODP07911 640 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 PRSS56P0CW18 603 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 TPH1P17752 444 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 MMP11P24347 488 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
TROAP-211ENST00000549891 CYLC1P35663 651 aaPredicted RBP13.06□□□□□ -0.32
TROAP-211ENST00000549891 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
TROAP-211ENST00000549891 PER3P56645 1201 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 TBX2Q13207 712 aaPredicted RBP13.06□□□□□ -0.32
TROAP-211ENST00000549891 DNAJC21Q5F1R6 531 aaKnown RBP13.06□□□□□ -0.32
TROAP-211ENST00000549891 AGAP7PQ5VUJ5 663 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 PRAMEF13Q5VWM6 474 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 KCTD11Q693B1 232 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 LINC00523Q86TU6 105 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 CUZD1Q86UP6 607 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 SLC34A3Q8N130 599 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 AGAP4Q96P64 663 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 RANBP9Q96S59 729 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 FAM118BQ9BPY3 351 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 TSSK1BQ9BXA7 367 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 MRM3Q9HC36 420 aaKnown RBP13.06□□□□□ -0.32
TROAP-211ENST00000549891 INTS7Q9NVH2 962 aaKnown RBP13.06□□□□□ -0.32
TROAP-211ENST00000549891 EURLQ9NYK6 297 aa13.06□□□□□ -0.32
TROAP-211ENST00000549891 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms