RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 COL6A6A6NMZ7 2263 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 PCSK5Q92824 1860 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 MDC1Q14676 2089 aaKnown RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 C2orf74A8MZ97 194 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 TMEM150CB9EJG8 249 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 NRP2O60462 931 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 USP1O94782 785 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 HAUS5O94927 633 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 C1orf105O95561 183 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 FAM87AP0C7U9 286 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 PKMP14618 531 aaKnown RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 PSMB5P28074 263 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 GABRB3P28472 473 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 OAS2P29728 719 aaKnown RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 SHMT2P34897 504 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 DLSTP36957 453 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 CLCN7P51798 805 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 ITGA8P53708 1063 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 TUBB4BP68371 445 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 TIAL1Q01085 375 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 DR1Q01658 176 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 ACY1Q03154 408 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 ABHD18Q0P651 414 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 CUL1Q13616 776 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 TUBB2AQ13885 445 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 CRYMQ14894 314 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 KYNUQ16719 465 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 LONRF1Q17RB8 773 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 BBS9Q3SYG4 887 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 HSP90AA5PQ58FG0 334 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 DNAJC21Q5F1R6 531 aaKnown RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 OTOAQ7RTW8 1153 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 LRRC6Q86X45 466 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 ZNF843Q8N446 348 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 ESX1Q8N693 406 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 C19orf47Q8N9M1 422 aaKnown RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 DENND1AQ8TEH3 1009 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 CT55Q8WUE5 264 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 SKA2Q8WVK7 121 aaPredicted RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 SLC45A3Q96JT2 553 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 PANX3Q96QZ0 392 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 TCF12Q99081 682 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 KRT12Q99456 494 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 TUBB2BQ9BVA1 445 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 SPRTNQ9H040 489 aaPredicted RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 PDE7BQ9NP56 450 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 IARS2Q9NSE4 1012 aaKnown RBP9.45□□□□□ -0.9
HDAC7-229ENST00000549883 POLG2Q9UHN1 485 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 FAM169AQ9Y6X4 670 aa9.45□□□□□ -0.9
HDAC7-229ENST00000549883 PIEZO2Q9H5I5 2752 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 MAGEB16A2A368 324 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 ISM1B1AKI9 464 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 H3BMH7 237 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 PRICKLE3O43900 615 aaPredicted RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 SCRG1O75711 98 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 ESR1P03372 595 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 PGAM1P18669 254 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 PAMP19021 973 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 CHRM3P20309 590 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 ELK3P41970 407 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 GRIA3P42263 894 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 RPL21P46778 160 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 RPS18P62269 152 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 PLOD1Q02809 727 aaPredicted RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 C2orf54Q08AI8 447 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 THOC5Q13769 683 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 MAP7Q14244 749 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 FASTKQ14296 549 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 FASTKD3Q14CZ7 662 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 TMED2Q15363 201 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 PLEKHS1Q5SXH7 462 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 HIBCHQ6NVY1 386 aaPredicted RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 TRMT10BQ6PF06 316 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 UNC5DQ6UXZ4 953 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 SYT10Q6XYQ8 523 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 KCNMB4Q86W47 210 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 TMEM126BQ8IUX1 230 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 DCUN1D3Q8IWE4 304 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 ZBTB2Q8N680 514 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 STARD8Q92502 1023 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 CFAP36Q96G28 342 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 NDNQ99608 321 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 EBNA1BP2Q99848 306 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 TSSK1BQ9BXA7 367 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 LHX9Q9NQ69 397 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 KCND1Q9NSA2 647 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 OR6C2Q9NZP2 312 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 FBXO5Q9UKT4 447 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 CHMP2BQ9UQN3 213 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 SNX24Q9Y343 169 aa9.44□□□□□ -0.9
HDAC7-229ENST00000549883 TNRC6AQ8NDV7 1962 aaKnown RBP9.44□□□□□ -0.9
HDAC7-229ENST00000549883 A0A0J9YY10 115 aa9.43□□□□□ -0.9
HDAC7-229ENST00000549883 A0A1W2PPV9 198 aa9.43□□□□□ -0.9
HDAC7-229ENST00000549883 ARHGEF33A8MVX0 844 aa9.43□□□□□ -0.9
HDAC7-229ENST00000549883 F8W8V4 182 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms