RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ARL10Q8N8L6 244 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 ANKRD42Q8N9B4 389 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 OR4C6Q8NH72 309 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 DLG3Q92796 817 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 RHBDF1Q96CC6 855 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 EGFL8Q99944 293 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 PCBD2Q9H0N5 130 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 CCDC134Q9H6E4 229 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 OR6C2Q9NZP2 312 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 CD274Q9NZQ7 290 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 OGFRQ9NZT2 677 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 CPSF2Q9P2I0 782 aaKnown RBP15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 CPNE7Q9UBL6 633 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 PTBP2Q9UKA9 531 aaKnown RBP15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 PSMD13Q9UNM6 376 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 HCN4Q9Y3Q4 1203 aa15.58■□□□□ 0.08
PRPF40A-212ENST00000545856 WDR87Q6ZQQ6 2873 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 LILRA5A6NI73 299 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 A8MT66 165 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 MATN2O00339 956 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 ENGP17813 658 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 IMPDH1P20839 514 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 WDR4P57081 412 aaKnown RBP15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 HERVK_113P63132 956 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 SHBQ15464 509 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 CSRP2Q16527 193 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 PDK4Q16654 411 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 CYP2A13Q16696 494 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 C14orf28Q4W4Y0 310 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 ATG16L1Q676U5 607 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 KLHL35Q6PF15 583 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 NUDCD3Q8IVD9 361 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 GPR156Q8NFN8 814 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 CFAP61Q8NHU2 1237 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 DYDC1Q8WWB3 177 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 MAGEB10Q96LZ2 347 aaPredicted RBP15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 FERD3LQ96RJ6 166 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 ERVK-6Q9BXR3 956 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 CAPS2Q9BXY5 557 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC40A1Q9NP59 571 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 ZNF624Q9P2J8 865 aaPredicted RBP15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 IKZF3Q9UKT9 509 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 WDFY4Q6ZS81 3184 aa15.57■□□□□ 0.08
PRPF40A-212ENST00000545856 TMEM114B3SHH9 223 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 UBXN8O00124 270 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 DLL1O00548 723 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 NUDT21O43809 227 aaKnown RBP15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 DLX3O60479 287 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 NPHS1O60500 1241 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 KATNA1O75449 491 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 RPS17P08708 135 aaKnown RBP15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 PNLIPP16233 465 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC19A1P41440 591 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 KCNC1P48547 511 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 EPHA4P54764 986 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 C1orf61Q13536 156 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 NAA25Q14CX7 972 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 LPAL2Q16609 132 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 PTGR2Q8N8N7 351 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 OR5AR1Q8NGP9 310 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 OR6Y1Q8NGX8 325 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC37A2Q8TED4 501 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC22A18Q96BI1 424 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 MAGEB18Q96M61 343 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 CAMK1GQ96NX5 476 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 MIPEPQ99797 713 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 TWSG1Q9GZX9 223 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 WWOXQ9NZC7 414 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 ENTPD2Q9Y5L3 495 aa15.56■□□□□ 0.08
PRPF40A-212ENST00000545856 ZNF292O60281 2723 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 VPS13AQ96RL7 3174 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 OR52A4PA6NMU1 304 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 SRRM3A6NNA2 597 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 FLRT2O43155 660 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 NOBOXO60393 691 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 STK16O75716 305 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 SERPINE1P05121 402 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 CELA2BP08218 269 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 IMPA1P29218 277 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 PKLRP30613 574 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 GMPRP36959 345 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 GPR3P46089 330 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC6A12P48065 614 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 HHEXQ03014 270 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 GRB7Q14451 532 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 NR1D2Q14995 579 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 PFKFB4Q16877 469 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 CAPN13Q6MZZ7 669 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 AGTRAPQ6RW13 159 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 DBX2Q6ZNG2 339 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 TMEM26Q6ZUK4 368 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 ZNF438Q7Z4V0 828 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 SLC25A45Q8N413 288 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 MINDY1Q8N5J2 469 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 OR2L8Q8NGY9 312 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 OR56A3Q8NH54 315 aa15.55■□□□□ 0.08
PRPF40A-212ENST00000545856 SETD7Q8WTS6 366 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms