RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 BAG5Q9UL15 447 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 SLC28A1O00337 649 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 NBNO60934 754 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 PGLSO95336 258 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 PDYNP01213 254 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 FTH1P02794 183 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 IL6P05231 212 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 BPIP17213 487 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 DGKAP23743 735 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 HNF1BP35680 557 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 SIM2Q14190 667 aaPredicted RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 USP39Q53GS9 565 aaKnown RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 CERS6Q6ZMG9 384 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 ZNF551Q7Z340 670 aaPredicted RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 RBFAQ8N0V3 343 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 PJA1Q8NG27 643 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 PLD4Q96BZ4 506 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 PYCR2Q96C36 320 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 TNKS2Q9H2K2 1166 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 TRPM5Q9NZQ8 1165 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 CRLS1Q9UJA2 301 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 FRMPD3Q5JV73 1810 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 TBKBP1A7MCY6 615 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 SLC1A7O00341 560 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 CLPXO76031 633 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 EPB42P16452 691 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 MSH3P20585 1137 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 LSM3P62310 102 aaKnown RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 RAPSNQ13702 412 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 ZXDCQ2QGD7 858 aaPredicted RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 GPRC6AQ5T6X5 926 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 SLC16A12Q6ZSM3 486 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 SAPCD2Q86UD0 394 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 DCP2Q8IU60 420 aaKnown RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 SNX29P2Q8IUI4 249 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 EID3Q8N140 333 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 AADATQ8N5Z0 425 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 CDK5RAP1Q96SZ6 601 aaKnown RBP15.44■□□□□ 0.06
LDLR-204ENST00000545707 MYOCQ99972 504 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 RAD21L1Q9H4I0 556 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 SERHLQ9NQF3 203 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 GPRC5BQ9NZH0 403 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 COQ6Q9Y2Z9 468 aa15.44■□□□□ 0.06
LDLR-204ENST00000545707 PLXNA4Q9HCM2 1894 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 C16orf96A6NNT2 1141 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 H7C4K7 107 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ZSCAN9O15535 394 aaPredicted RBP15.43■□□□□ 0.06
LDLR-204ENST00000545707 BNIP3LO60238 219 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 SCELO95171 688 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 EPORP19235 508 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ALDH4A1P30038 563 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 FMO3P31513 532 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 GP2P55259 537 aaKnown RBP15.43■□□□□ 0.06
LDLR-204ENST00000545707 SMAD3P84022 425 aaKnown RBP15.43■□□□□ 0.06
LDLR-204ENST00000545707 ZXDBP98169 803 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 IL5RAQ01344 420 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 MTA1Q13330 715 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 GPNMBQ14956 572 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 TAF12Q16514 161 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 TRIM46Q7Z4K8 759 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 SNX20Q7Z614 316 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 GPR149Q86SP6 731 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 RNF180Q86T96 592 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 RHNO1Q9BSD3 238 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 CWH43Q9H720 699 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 GPN2Q9H9Y4 310 aaPredicted RBP15.43■□□□□ 0.06
LDLR-204ENST00000545707 TBCCD1Q9NVR7 557 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 C1orf109Q9NX04 203 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 RNF186Q9NXI6 227 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 MBD1Q9UIS9 605 aaPredicted RBP15.43■□□□□ 0.06
LDLR-204ENST00000545707 LRFN2Q9ULH4 789 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 TRBV5-3A0A0A0MS03 114 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 STK16O75716 305 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ZNF682O95780 498 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ACRV1P26436 265 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 OPRL1P41146 370 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 TUBA3CQ13748 450 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 GTF2H3Q13889 308 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 CARD16Q5EG05 197 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 RFLNAQ6ZTI6 216 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 CYP4Z1Q86W10 505 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ZSWIM9Q86XI8 627 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ADHFE1Q8IWW8 467 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 CHPFQ8IZ52 775 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ARL10Q8N8L6 244 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 ABHD11Q8NFV4 315 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 OR5K1Q8NHB7 308 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 NODALQ96S42 347 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 KLF16Q9BXK1 252 aaPredicted RBP15.43■□□□□ 0.06
LDLR-204ENST00000545707 PARVBQ9HBI1 364 aa15.43■□□□□ 0.06
LDLR-204ENST00000545707 NUP214P35658 2090 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 MKI67P46013 3256 aaKnown RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 GLYATL1P3A0A0U1RQE8 302 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 CFAP99D6REC4 459 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 PER2O15055 1255 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 ITGALP20701 1170 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 CST5P28325 142 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 MAP2K4P45985 399 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 GZMMP51124 257 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms