RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	C19orf47	Q8N9M1	422 aa	Known RBP	12.95	□□□□□ -0.34
POLE-222	ENST00000545015	SLC38A9	Q8NBW4	561 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	OR1L3	Q8NH93	324 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	HMGCLL1	Q8TB92	370 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	CT55	Q8WUE5	264 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	ANP32B	Q92688	251 aa	Known RBP	12.95	□□□□□ -0.34
POLE-222	ENST00000545015	SLC22A18	Q96BI1	424 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	ARHGAP9	Q9BRR9	750 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	RAB11FIP5	Q9BXF6	653 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	SERTAD3	Q9UJW9	196 aa		12.95	□□□□□ -0.34
POLE-222	ENST00000545015	TDRKH	Q9Y2W6	561 aa	Known RBP	12.95	□□□□□ -0.34
POLE-222	ENST00000545015	ZNF462	Q96JM2	2506 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015		A0A0J9YY10	115 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	USP27X	A6NNY8	438 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	MEN1	O00255	615 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	RASGRF2	O14827	1237 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	CREG1	O75629	220 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	MATN4	O95460	622 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	C1orf105	O95561	183 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	S1PR4	O95977	384 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	RAB40AL	P0C0E4	278 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	FAM87A	P0C7U9	286 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	PVR	P15151	417 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	CD9	P21926	228 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	CCNF	P41002	786 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	CCR10	P46092	362 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	GPS2	Q13227	327 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	PTK6	Q13882	451 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	DHX34	Q14147	1143 aa	Known RBP	12.94	□□□□□ -0.34
POLE-222	ENST00000545015	ZIC1	Q15915	447 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	CASC4	Q6P4E1	433 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	HOOK3	Q86VS8	718 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	CREG2	Q8IUH2	290 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	DSEL	Q8IZU8	1212 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	LINC01555	Q8NAE3	123 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	OR2L8	Q8NGY9	312 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	RAD51AP1	Q96B01	352 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	ZNF669	Q96BR6	464 aa	Predicted RBP	12.94	□□□□□ -0.34
POLE-222	ENST00000545015	DPH2	Q9BQC3	489 aa	Predicted RBP	12.94	□□□□□ -0.34
POLE-222	ENST00000545015	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.94	□□□□□ -0.34
POLE-222	ENST00000545015	FAM60A	Q9NP50	221 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	KLK4	Q9Y5K2	254 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	MRPS18B	Q9Y676	258 aa	Known RBP	12.94	□□□□□ -0.34
POLE-222	ENST00000545015	FAM169A	Q9Y6X4	670 aa		12.94	□□□□□ -0.34
POLE-222	ENST00000545015	TMEM150C	B9EJG8	249 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	GOLGA8K	D6RF30	607 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	GOLGA8T	H3BQL2	631 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	DNALI1	O14645	258 aa	Predicted RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	PRICKLE3	O43900	615 aa	Predicted RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	KLK3	P07288	261 aa	Predicted RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	HBQ1	P09105	142 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	PKM	P14618	531 aa	Known RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	IVD	P26440	423 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	PTPN4	P29074	926 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	FMO4	P31512	558 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	PTGIR	P43119	386 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	CSE1L	P55060	971 aa	Known RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	ITGA1	P56199	1179 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	POLE2	P56282	527 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	ZNF385C	Q66K41	422 aa	Predicted RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	TTC23L	Q6PF05	361 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	NEK10	Q6ZWH5	1172 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	PCGF5	Q86SE9	256 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	ZNF605	Q86T29	641 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	SYVN1	Q86TM6	617 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	DNAJC22	Q8N4W6	341 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	OTUD6B	Q8N6M0	293 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	GSDMB	Q8TAX9	411 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	CALML6	Q8TD86	181 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	MAGEC3	Q8TD91	643 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	APOBEC4	Q8WW27	367 aa	Known RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	RUNDC3B	Q96NL0	473 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	TRIM56	Q9BRZ2	755 aa	Known RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	DDX47	Q9H0S4	455 aa	Known RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	SLC25A18	Q9H1K4	315 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	PCMTD2	Q9NV79	361 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	PLAGL1	Q9UM63	463 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	AP1M2	Q9Y6Q5	423 aa		12.93	□□□□□ -0.34
POLE-222	ENST00000545015	TLN1	Q9Y490	2541 aa	Known RBP	12.93	□□□□□ -0.34
POLE-222	ENST00000545015	ISM1	B1AKI9	464 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015		E7EQ34	232 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	GOLGA8M	H3BSY2	632 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	SMAP	O00193	183 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	NIPSNAP2	O75323	286 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	CAPN1	P07384	714 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	PRKAR1A	P10644	381 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	ERG	P11308	486 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	PLA2G2A	P14555	144 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	CYP2A7	P20853	494 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	CLCN7	P51798	805 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	TERF1	P54274	439 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	KCNAB2	Q13303	367 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	PPP1R7	Q15435	360 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	UGT8	Q16880	541 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	LONRF1	Q17RB8	773 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	PRAMEF17	Q5VTA0	474 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	TRIM73	Q86UV7	250 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	KCNJ9	Q92806	393 aa		12.92	□□□□□ -0.34
POLE-222	ENST00000545015	FOPNL	Q96NB1	174 aa		12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms