RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 CD274Q9NZQ7 290 aa9.87□□□□□ -0.83
CPSF7-221ENST00000543545 SENP1Q9P0U3 644 aa9.87□□□□□ -0.83
CPSF7-221ENST00000543545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-221ENST00000543545 NOVA2Q9UNW9 492 aaKnown RBP9.87□□□□□ -0.83
CPSF7-221ENST00000543545 PDE10AQ9Y233 779 aa9.87□□□□□ -0.83
CPSF7-221ENST00000543545 U3KQA8 63 aa9.87□□□□□ -0.83
CPSF7-221ENST00000543545 GSAPA4D1B5 854 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 KRT87PA6NCN2 255 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 LILRA5A6NI73 299 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 ZNF839A8K0R7 811 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 SYCE1LA8MT33 242 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 DYNC1I1O14576 645 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 SLC30A4O14863 429 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 B4GAT1O43505 415 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 GLRA3O75311 464 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 UBXN7O94888 489 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 RPLP0P05388 317 aaKnown RBP9.86□□□□□ -0.83
CPSF7-221ENST00000543545 PROS1P07225 676 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 GSTA1P08263 222 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 ANXA5P08758 320 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 PNLIPP16233 465 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 SDHBP21912 280 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 SHMT2P34897 504 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 HSD17B2P37059 387 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 GPR3P46089 330 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 CSRP3P50461 194 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 RAB28P51157 221 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 NOVA1P51513 510 aaKnown RBP9.86□□□□□ -0.83
CPSF7-221ENST00000543545 AP1S2P56377 157 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 CCL7P80098 99 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 PERM1Q5SV97 790 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 N4BP2L1Q5TBK1 243 aaPredicted RBP9.86□□□□□ -0.83
CPSF7-221ENST00000543545 TAX1BP1Q86VP1 789 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 LCA5Q86VQ0 697 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 OOSP2Q86WS3 158 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 LMNTD1Q8N9Z9 388 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 FBXO15Q8NCQ5 510 aaPredicted RBP9.86□□□□□ -0.83
CPSF7-221ENST00000543545 ATL1Q8WXF7 558 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 NCSTNQ92542 709 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 NRTNQ99748 197 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 MRPL57Q9BQC6 102 aaKnown RBP9.86□□□□□ -0.83
CPSF7-221ENST00000543545 RAB11FIP5Q9BXF6 653 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 HRASLS2Q9NWW9 162 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 CPSF2Q9P2I0 782 aaKnown RBP9.86□□□□□ -0.83
CPSF7-221ENST00000543545 GRID1Q9ULK0 1009 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 OARD1Q9Y530 152 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 PCDH15Q96QU1 1955 aa9.86□□□□□ -0.83
CPSF7-221ENST00000543545 TNRC6BQ9UPQ9 1833 aaKnown RBP9.86□□□□□ -0.83
CPSF7-221ENST00000543545 SPAARA0A1B0GVQ0 90 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 ISM1B1AKI9 464 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 AGPSO00116 658 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 UBXN8O00124 270 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 MYO1CO00159 1063 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 MAP2K7O14733 419 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 DUX1O43812 170 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 KERAO60938 352 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SMIM24O75264 130 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 RFPL3O75679 317 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SASH3O75995 380 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SLC16A8O95907 504 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 TPBGLP0DKB5 382 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 GFAPP14136 432 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 POLR2CP19387 275 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-221ENST00000543545 TAC1P20366 129 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 CSRP1P21291 193 aaKnown RBP9.85□□□□□ -0.83
CPSF7-221ENST00000543545 ACP1P24666 158 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 PKLRP30613 574 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 CRHR1P34998 444 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 PLA2G5P39877 138 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 KCNC1P48547 511 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 PNLIPRP1P54315 467 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 EPHA4P54764 986 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 MAGOHP61326 146 aaKnown RBP9.85□□□□□ -0.83
CPSF7-221ENST00000543545 GPLD1P80108 840 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SIM1P81133 766 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-221ENST00000543545 E2F1Q01094 437 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SLC18A2Q05940 514 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 NAE1Q13564 534 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 THEMIS2Q5TEJ8 643 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 ANKS6Q68DC2 871 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 IRGCQ6NXR0 463 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SBSNQ6UWP8 590 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 MBOAT1Q6ZNC8 495 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SH2D5Q6ZV89 423 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 ZNF438Q7Z4V0 828 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SPRED1Q7Z699 444 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 CLEC14AQ86T13 490 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 EXOC3L1Q86VI1 746 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 RHEBL1Q8TAI7 183 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 BAHD1Q8TBE0 780 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-221ENST00000543545 SMPDL3AQ92484 453 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 ARL8AQ96BM9 186 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 MED8Q96G25 268 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 GPR78Q96P69 363 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 ATG10Q9H0Y0 220 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 MRPL46Q9H2W6 279 aaKnown RBP9.85□□□□□ -0.83
CPSF7-221ENST00000543545 LRRN3Q9H3W5 708 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 EPB41L1Q9H4G0 881 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 ZNF446Q9NWS9 450 aa9.85□□□□□ -0.83
CPSF7-221ENST00000543545 WWOXQ9NZC7 414 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms