RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 ZNF30P17039 623 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 KRT15P19012 456 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 HNRNPA2B1P22626 353 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ABCD3P28288 659 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SLC7A1P30825 629 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ADRA1AP35348 466 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MPLP40238 635 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 VPS41P49754 854 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 DR1Q01658 176 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 RALGDSQ12967 914 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 GPS1Q13098 491 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PTPRRQ15256 657 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 WHAMMP3Q1A5X7 153 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 DUOXA1Q1HG43 343 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ZNF674Q2M3X9 581 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CCDC157Q569K6 752 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 C3orf38Q5JPI3 329 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SIRPB2Q5JXA9 342 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 LRRC66Q68CR7 880 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 GPR139Q6DWJ6 353 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 NAPEPLDQ6IQ20 393 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 RAB12Q6IQ22 244 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 IRGCQ6NXR0 463 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CRTC1Q6UUV9 634 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 LIPIQ6XZB0 460 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PPP1R21Q6ZMI0 780 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ZCCHC9Q8N567 271 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 GLIS1Q8NBF1 620 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CEP76Q8TAP6 659 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 DNASE2BQ8WZ79 361 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ZNF845Q96IR2 970 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SMIM14Q96QK8 99 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MYOCQ99972 504 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 APOL2Q9BQE5 337 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 GPR63Q9BZJ6 419 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 DDX47Q9H0S4 455 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MAGEE1Q9HCI5 957 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 TMEM74BQ9NUR3 256 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 GPATCH2Q9NW75 528 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PCYOX1Q9UHG3 505 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 FBXL7Q9UJT9 491 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PILRBQ9UKJ0 227 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SNX11Q9Y5W9 270 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ANKRD11Q6UB99 2663 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 KMT2BQ9UMN6 2715 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 WDR87Q6ZQQ6 2873 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MYO15AQ9UKN7 3530 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 A0A0U1RQS6 177 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 A0A1B0GTW7 788 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 A0A1W2PPL8 197 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SHISA3A0PJX4 238 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 H0Y8X5 98 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PSMD11O00231 422 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 FPGTO14772 594 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PIP5K1BO14986 540 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PHGDHO43175 533 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ASNA1O43681 348 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 USP12O75317 370 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 RECQL5O94762 991 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 AMY2AP04746 511 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CFIP05156 583 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 APRTP07741 180 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ATXN1LP0C7T5 689 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PIRTP0C851 137 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 AMY2BP19961 511 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 LHCGRP22888 699 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CHMP24386 653 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ADCY8P40145 1251 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SUMO3P55854 103 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 C21orf59P57076 290 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SARNPP82979 210 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 C2orf54Q08AI8 447 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 OLIG2Q13516 323 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 DHX34Q14147 1143 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 FGL2Q14314 439 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CCDC6Q16204 474 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CNGA3Q16281 694 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 UGT8Q16880 541 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MUM1Q2TAK8 710 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 DNTTIP2Q5QJE6 756 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CPZQ66K79 652 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 KCTD11Q693B1 232 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 RANBP10Q6VN20 620 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 GLT6D1Q7Z4J2 308 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 HSD11B1LQ7Z5J1 315 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 TSPAN33Q86UF1 283 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 DNAAF3Q8N9W5 541 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 RCBTB1Q8NDN9 531 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MNS1Q8NEH6 495 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SPATA4Q8NEY3 305 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 BLOC1S5Q8TDH9 187 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 NRG4Q8WWG1 115 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 SLCO2A1Q92959 643 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 UBE2FQ969M7 185 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 RGMAQ96B86 450 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 NUS1Q96E22 293 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MISP3Q96FF7 219 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ZNF764Q96H86 408 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 MOGAT1Q96PD6 335 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 LENG8Q96PV6 779 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms