RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TRAM2Q15035 370 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ACOX1Q15067 660 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TIGD6Q17RP2 521 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 AAK1Q2M2I8 961 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 KIF19Q2TAC6 998 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SMTNL2Q2TAL5 461 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 AP5B1Q2VPB7 878 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 MCMDC2Q4G0Z9 681 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ATP13A5Q4VNC0 1218 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 LRRC24Q50LG9 513 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 MDH1BQ5I0G3 518 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PABPC1L2AQ5JQF8 200 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 NKAPLQ5M9Q1 402 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 MARCH8Q5T0T0 291 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PDZK1Q5T2W1 519 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ARL6IP4Q66PJ3 421 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 DENND5AQ6IQ26 1287 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 LIN54Q6MZP7 749 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 CNNM4Q6P4Q7 775 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TMEM26Q6ZUK4 368 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 KCTD8Q6ZWB6 473 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 UBE2R2Q712K3 238 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ARCQ7LC44 396 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 OTOP1Q7RTM1 612 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SSX9Q7RTT3 188 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 EFL1Q7Z2Z2 1120 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SLCO6A1Q86UG4 719 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 AACSQ86V21 672 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ZFAND4Q86XD8 727 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 KRT73Q86Y46 540 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PHC2Q8IXK0 858 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 DSELQ8IZU8 1212 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PLD6Q8N2A8 252 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SPATA6LQ8N4H0 392 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TMEM199Q8N511 208 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 C7orf31Q8N865 590 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF366Q8N895 744 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 GDPD1Q8N9F7 314 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 C8orf58Q8NAV2 365 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ZBTB44Q8NCP5 570 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 MCPH1Q8NEM0 835 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 GPR156Q8NFN8 814 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 CMASQ8NFW8 434 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 KBTBD8Q8NFY9 601 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 OR5T1Q8NG75 326 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 OR13C3Q8NGS6 347 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TSPEARQ8WU66 669 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SLC22A17Q8WUG5 538 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 DCAKDQ8WVC6 231 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SLC7A6Q92536 515 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 IP6K1Q92551 441 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 DIO2Q92813 273 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 DDX17Q92841 729 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 RBPMSQ93062 196 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SCLYQ96I15 445 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 HRASLS5Q96KN8 279 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SIGLEC10Q96LC7 697 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 GLT1D1Q96MS3 346 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF558Q96NG5 402 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 LRFN5Q96NI6 719 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PTCHD1Q96NR3 888 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 RDH12Q96NR8 316 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 LMF1Q96S06 567 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 NEU1Q99519 415 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 BARD1Q99728 777 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 KCTD14Q9BQ13 255 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SLC25A23Q9BV35 468 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PTDSS2Q9BVG9 487 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 UCK2Q9BZX2 261 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF518BQ9C0D4 1074 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 NMUR2Q9GZQ4 415 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 RNF32Q9H0A6 362 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SAV1Q9H4B6 383 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 WDR26Q9H7D7 661 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 CATSPERBQ9H7T0 1116 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TRPV4Q9HBA0 871 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SPACA1Q9HBV2 294 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 GPRC5CQ9NQ84 441 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TLR9Q9NR96 1032 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF275Q9NSD4 429 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 CATSPERZQ9NTU4 200 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 LYARQ9NX58 379 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 THUMPD1Q9NXG2 353 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 BABAM2Q9NXR7 383 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 NKIRAS2Q9NYR9 191 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TREM2Q9NZC2 230 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF224Q9NZL3 707 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 HSPBP1Q9NZL4 362 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PSMC3IPQ9P2W1 217 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 NFKBIL1Q9UBC1 381 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 SRP68Q9UHB9 627 aaKnown RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 RAPGEFL1Q9UHV5 662 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 TRPC5Q9UL62 973 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-219ENST00000542112 ABCG2Q9UNQ0 655 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 USP22Q9UPT9 525 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 BTBD3Q9Y2F9 522 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 NR2E1Q9Y466 385 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PCDHGB1Q9Y5G3 927 aa4.26□□□□□ -1.73
SNHG1-219ENST00000542112 PCDHA11Q9Y5I1 949 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms