RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PHEXP78562 749 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 TMF1P82094 1093 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 MECOMQ03112 1051 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 SREBF2Q12772 1141 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 ZNF234Q14588 700 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 INAQ16352 499 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 HYAL4Q2M3T9 481 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 CCDC57Q2TAC2 916 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 LETM2Q2VYF4 491 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 ZNF718Q3SXZ3 478 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 ARMC4Q5T2S8 1044 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 WLSQ5T9L3 541 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 SHQ1Q6PI26 577 aaKnown RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 PAPD4Q6PIY7 484 aaKnown RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 TRAT1Q6PIZ9 186 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 RUFY3Q7L099 469 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 CENPQQ7L2Z9 268 aaPredicted RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 GLRX5Q86SX6 157 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 AACSQ86V21 672 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 IQCHQ86VS3 1027 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 NRROSQ86YC3 692 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 UNC45BQ8IWX7 931 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 MUC20Q8N307 709 aaPredicted RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 RFLNBQ8N5W9 214 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 EMC1Q8N766 993 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 PI4KAP1Q8N8J0 262 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 TRIM58Q8NG06 486 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 PPP4R1Q8TF05 950 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 SLC38A5Q8WUX1 472 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 ANKRD49Q8WVL7 239 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.12□□□□□ -1.91
USP28-210ENST00000542033 SLC35B4Q969S0 331 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 TBC1D31Q96DN5 1066 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 CFAP36Q96G28 342 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 CCDC114Q96M63 670 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 DACH2Q96NX9 599 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 ALS2CR12Q96Q35 445 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 SMC6Q96SB8 1091 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 CDRT15Q96T59 188 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 PCYT2Q99447 389 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 EPYCQ99645 322 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 SYT17Q9BSW7 474 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 OSBPL10Q9BXB5 764 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 TRIM4Q9C037 500 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 SLC7A5P2Q9GIP4 190 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 DNAI2Q9GZS0 605 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 SPATC1LQ9H0A9 340 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 CSTL1Q9H114 145 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 COPS7BQ9H9Q2 264 aaPredicted RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 DBNDD1Q9H9R9 158 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 FKRPQ9H9S5 495 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 ZNF556Q9HAH1 456 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 PIH1D3Q9NQM4 214 aaKnown RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 PAG1Q9NWQ8 432 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 MTMR10Q9NXD2 777 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 EPS15L1Q9UBC2 864 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 CRNNQ9UBG3 495 aaPredicted RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 DNAJB4Q9UDY4 337 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 RALYQ9UKM9 306 aaKnown RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 PADI3Q9ULW8 664 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 POMT1Q9Y6A1 747 aa3.12□□□□□ -1.91
USP28-210ENST00000542033 TRIP12Q14669 1992 aaPredicted RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 ROCK2O75116 1388 aaKnown RBP3.12□□□□□ -1.91
USP28-210ENST00000542033 CLIP1P30622 1438 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TRAV34A0A0B4J273 112 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 EDDM13A0A1B0GTR0 161 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ARHGEF37A1IGU5 675 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ENO4A6NNW6 628 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 C19orf81C9J6K1 198 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 FAM90A26D6RGX4 464 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 CCDC188H7C350 402 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 PSMD14O00487 310 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 LIN7AO14910 233 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 SMAD9O15198 467 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 ZNHIT1O43257 154 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 KRT86O43790 486 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 WDR1O75083 606 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TADA2AO75478 443 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 DDNO94850 711 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 ERLIN2O94905 339 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 C22orf31O95567 290 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 STAMBPO95630 424 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 FGFR1OPO95684 399 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 ATP1A1P05023 1023 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 TROVE2P10155 538 aaKnown RBP eCLIP3.11□□□□□ -1.91
USP28-210ENST00000542033 VPREB1P12018 145 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 HLA-DOBP13765 273 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 PRLRP16471 622 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 FERP16591 822 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ITGA2P17301 1181 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 UGT1A1P22309 533 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TCEA1P23193 301 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 MT3P25713 68 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TLX1P31314 330 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 MC5RP33032 325 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 CSTF2P33240 577 aaKnown RBP eCLIP3.11□□□□□ -1.91
USP28-210ENST00000542033 FMO5P49326 533 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 NPY4RP50391 375 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 FUT6P51993 359 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 SIRPAP78324 504 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms