RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 TMEM110Q86TL2 294 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 PEX5LQ8IYB4 626 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 PI4KAP1Q8N8J0 262 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 XXYLT1Q8NBI6 393 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 HMGCLL1Q8TB92 370 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 BRSK1Q8TDC3 778 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 TAF15Q92804 592 aaKnown RBP eCLIP3.37□□□□□ -1.87
LEMD3-204ENST00000542032 APBB2Q92870 758 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 ZNF524Q96C55 264 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 PDLIM5Q96HC4 596 aaKnown RBP3.37□□□□□ -1.87
LEMD3-204ENST00000542032 CNDP1Q96KN2 507 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 ZNF583Q96ND8 569 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 F2RL3Q96RI0 385 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 TUBB2BQ9BVA1 445 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 RBM4Q9BWF3 364 aaKnown RBP3.37□□□□□ -1.87
LEMD3-204ENST00000542032 GPR88Q9GZN0 384 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 GOLPH3LQ9H4A5 285 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 VPS37BQ9H9H4 285 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 KIF9Q9HAQ2 790 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 ARHGEF38Q9NXL2 777 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 TAS2R3Q9NYW6 316 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 CRNNQ9UBG3 495 aaPredicted RBP3.37□□□□□ -1.87
LEMD3-204ENST00000542032 OSGIN1Q9UJX0 560 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 PLAGL1Q9UM63 463 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 PPIEQ9UNP9 301 aaKnown RBP3.37□□□□□ -1.87
LEMD3-204ENST00000542032 MTMR6Q9Y217 621 aa3.37□□□□□ -1.87
LEMD3-204ENST00000542032 RNF103-CHMP3A0A140T963 221 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 A0A1W2PRG0 241 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 A0A1W2PRV1 198 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 C2orf81A6NN90 581 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 PMS2P5A8MQ11 134 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 RNF103O00237 685 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 ZNF263O14978 683 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 RIPK2O43353 540 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SYNGR3O43761 229 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 TSC22D2O75157 780 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 IPO7O95373 1038 aaKnown RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 GCNT3O95395 438 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 ZNF182P17025 639 aaPredicted RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 UGT1A1P22309 533 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SSR1P43307 286 aaKnown RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 VEGFCP49767 419 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SULT1E1P49888 294 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 PNLIPRP2P54317 469 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 STARD6P59095 220 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 TUBB4BP68371 445 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 ZNF273Q14593 569 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 DLG2Q15700 870 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 CEP55Q53EZ4 464 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SOWAHCQ53LP3 525 aaPredicted RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 HSP90AA5PQ58FG0 334 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SIRPB2Q5JXA9 342 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 RGS9BPQ6ZS82 235 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 PLEKHM3Q6ZWE6 761 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 LPCAT2Q7L5N7 544 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 CAMKMTQ7Z624 323 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SYCP3Q8IZU3 236 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SIX6OS1Q8N1H7 587 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SFRP1Q8N474 314 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 HDDC3Q8N4P3 179 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 TC2NQ8N9U0 490 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 CORO2AQ92828 525 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 LRRC59Q96AG4 307 aaKnown RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 PTERQ96BW5 349 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 LGALS12Q96DT0 336 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 LITAFQ99732 161 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 PCGF1Q9BSM1 259 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 CRACR2AQ9BSW2 395 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 POLR3CQ9BUI4 534 aaPredicted RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 ABCG8Q9H221 673 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 HRH4Q9H3N8 390 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 RANGRFQ9HD47 186 aaPredicted RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SCRT2Q9NQ03 307 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 ANO10Q9NW15 660 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 HOXC10Q9NYD6 342 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 GDE1Q9NZC3 331 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 PCSK1NQ9UHG2 260 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 EXOC7Q9UPT5 735 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 AURKCQ9UQB9 309 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 PIN4Q9Y237 131 aaKnown RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 SPAG9O60271 1321 aaKnown RBP3.36□□□□□ -1.87
LEMD3-204ENST00000542032 IGSF1Q8N6C5 1336 aa3.36□□□□□ -1.87
LEMD3-204ENST00000542032 IGLV5-45A0A087WSX0 123 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 A0A0B4J203 849 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 CLRN2A0PK11 232 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 LRRD1A4D1F6 860 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 C5orf60A6NFR6 353 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 M0QZ24 198 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 UBXN8O00124 270 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 CACNB4O00305 520 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 MCF2LO15068 1137 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 HS6ST1O60243 411 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 PRKNO60260 465 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 MITFO75030 526 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 AVILO75366 819 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 BCAS2O75934 225 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 REC8O95072 547 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 NKX2-2O95096 273 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 IFNB1P01574 187 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 MMP9P14780 707 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms