RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ADI1Q9BV57 179 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 RBM38Q9H0Z9 239 aaKnown RBP17.49■□□□□ 0.39
GNE-204ENST00000539208 PIF1Q9H611 641 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 ZFP14Q9HCL3 533 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 CD84Q9UIB8 345 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 SLC8A2Q9UPR5 921 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 MYOCOSA0A1B0GUC4 107 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 PABPN1LA6NDY0 278 aaKnown RBP17.49■□□□□ 0.39
GNE-204ENST00000539208 PLOD2O00469 737 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 VILLO15195 856 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 DFNA5O60443 496 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 RHOP08100 348 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 ACPPP15309 386 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 POLR2EP19388 210 aaKnown RBP17.49■□□□□ 0.39
GNE-204ENST00000539208 VASPP50552 380 aaPredicted RBP17.49■□□□□ 0.39
GNE-204ENST00000539208 CLDN8P56748 225 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 TUBA4AP68366 448 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 CPSF6Q16630 551 aaKnown RBP eCLIP17.49■□□□□ 0.39
GNE-204ENST00000539208 LRRC73Q5JTD7 316 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 SPANXN4Q5MJ08 99 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 LY6G5CQ5SRR4 150 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 RBM44Q6ZP01 1051 aaKnown RBP17.49■□□□□ 0.39
GNE-204ENST00000539208 DET1Q7L5Y6 550 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 VRK3Q8IV63 474 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 LEMD2Q8NC56 503 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 OR52E4Q8NGH9 312 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 MCOLN3Q8TDD5 553 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 MRGPRX3Q96LB0 322 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 FAM83CQ9BQN1 747 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 GRIP2Q9C0E4 1043 aa17.49■□□□□ 0.39
GNE-204ENST00000539208 CLK4Q9HAZ1 481 aaKnown RBP17.49■□□□□ 0.39
GNE-204ENST00000539208 MYOFQ9NZM1 2061 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 GMNNO75496 209 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 PRSS23O95084 383 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 ZNF23P17027 643 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 GJA8P48165 433 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 CYP4F3Q08477 520 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 PTCHD3Q3KNS1 767 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 RUNDC3AQ59EK9 446 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 HSD11B1LQ7Z5J1 315 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 TRAM1L1Q8N609 369 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 HCAR2Q8TDS4 363 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 SELENOMQ8WWX9 145 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 ELOVL6Q9H5J4 265 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 VCX3AQ9NNX9 186 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 TMED5Q9Y3A6 229 aa17.48■□□□□ 0.39
GNE-204ENST00000539208 TRBV5-3A0A0A0MS03 114 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 ZBBXA8MT70 800 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 QSOX1O00391 747 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 SGTAO43765 313 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 LEFTY1O75610 366 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 RFPL2O75678 378 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 RAP2AP10114 183 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 HOXA9P31269 272 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 RPS14P62263 151 aaKnown RBP17.47■□□□□ 0.39
GNE-204ENST00000539208 KCNC3Q14003 757 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 KCTD21Q4G0X4 260 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 MSRB3Q8IXL7 192 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 FAM47BQ8NA70 645 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 DDHD1Q8NEL9 900 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 OR2T12Q8NG77 320 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 SKA2Q8WVK7 121 aaPredicted RBP17.47■□□□□ 0.39
GNE-204ENST00000539208 ASZ1Q8WWH4 475 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 CMTM7Q96FZ5 175 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 RNF145Q96MT1 663 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 SEPHS2Q99611 448 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 P2RY13Q9BPV8 354 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 DNAJC11Q9NVH1 559 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 DMTF1Q9Y222 760 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 MAN2B2Q9Y2E5 1009 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 UPK3BL1B0FP48 263 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 UPK3BL2E5RIL1 263 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 CLOCKO15516 846 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 ERN1O75460 977 aaKnown RBP17.47■□□□□ 0.39
GNE-204ENST00000539208 SLCO2B1O94956 709 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 FTH1P02794 183 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 TIMP2P16035 220 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 MAPK1P28482 360 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 SOX11P35716 441 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 NNMTP40261 264 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 ZNF33BQ06732 778 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 LSAMPQ13449 338 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 FAM98BQ52LJ0 330 aaKnown RBP17.47■□□□□ 0.39
GNE-204ENST00000539208 HENMT1Q5T8I9 393 aaKnown RBP17.47■□□□□ 0.39
GNE-204ENST00000539208 PLPP4Q5VZY2 271 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 NEK5Q6P3R8 708 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 FKBP9P1Q75LS8 142 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 ALDH16A1Q8IZ83 802 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 KRTCAP2Q8N6L1 136 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 ZNF548Q8NEK5 533 aaPredicted RBP17.47■□□□□ 0.39
GNE-204ENST00000539208 ITFG1Q8TB96 612 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 SCAMP4Q969E2 229 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 MTFMTQ96DP5 389 aaKnown RBP17.47■□□□□ 0.39
GNE-204ENST00000539208 LRIG1Q96JA1 1093 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 OR52E6Q96RD3 313 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 ZSCAN5AQ9BUG6 496 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 CAAP1Q9H8G2 361 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 PCDH12Q9NPG4 1184 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 SLC25A37Q9NYZ2 338 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms