RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RACK1P63244 317 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 MFSD10Q14728 455 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 PRSS36Q5K4E3 855 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 ZCCHC8Q6NZY4 707 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 SAPCD2Q86UD0 394 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GALNT12Q8IXK2 581 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 TADA1Q96BN2 335 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 SENP8Q96LD8 212 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 CSNK1G1Q9HCP0 422 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 RASSF1Q9NS23 344 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 AGO1Q9UL18 857 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 PIN4Q9Y237 131 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GRIP1Q9Y3R0 1128 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GBF1Q92538 1859 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 J3KR12 359 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 RPLP0P05388 317 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 ARL1P40616 181 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 PTGR1Q14914 329 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 TBCEQ15813 527 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 TIGD6Q17RP2 521 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GPR21Q99679 349 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 TMEM246Q9BRR3 403 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 C1orf109Q9NX04 203 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 CD274Q9NZQ7 290 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 LOC110117498-PIK3R3F6TDL0 507 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 SSX4O60224 188 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 IGFBP6P24592 240 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 HOXA9P31269 272 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 CA8P35219 290 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 MAGEA11P43364 429 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 HK3P52790 923 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GTF2H3Q13889 308 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 OR2T5Q6IEZ7 315 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 CALHM3Q86XJ0 350 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GPSM1Q86YR5 675 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 CCDC71Q8IV32 467 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 PHACTR4Q8IZ21 702 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GLB1L3Q8NCI6 653 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 OR2T29Q8NH02 315 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 ARRDC2Q8TBH0 407 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 PIK3R3Q92569 461 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 ST6GAL2Q96JF0 529 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 TRMT13Q9NUP7 481 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 CRNNQ9UBG3 495 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 MAU2Q9Y6X3 613 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 WASH4PA8MWX3 477 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 IL6P05231 212 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 DARSP14868 501 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 EPHA2P29317 976 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 CDC42EP1Q00587 391 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 ELP6Q0PNE2 266 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 STARD3Q14849 445 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 SLC46A3Q7Z3Q1 461 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 TMEM86AQ8N2M4 240 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 PPP3R2Q96LZ3 170 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 COPS4Q9BT78 406 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 CCDC32Q9BV29 185 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 ADPRHL2Q9NX46 363 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 TRBV5-3A0A0A0MS03 114 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 GOLGA8CPA6NN73 597 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 ARVCFO00192 962 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 MUSKO15146 869 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 PCDHGA12O60330 932 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 PGRP06401 933 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 PRSS56P0CW18 603 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 SLC15A1P46059 708 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 C14orf80Q86SX3 495 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 PLPP6Q8IY26 295 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 UMODL1-AS1Q8N2C9 162 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 OR10Q1Q8NGQ4 319 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 TRIM63Q969Q1 353 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 FAM120BQ96EK7 910 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 PITX2Q99697 317 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 SNX6Q9UNH7 406 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 LYVE1Q9Y5Y7 322 aa18.18■□□□□ 0.5
SFSWAP-207ENST00000538548 CAPN5O15484 640 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 TSPAN12O95859 305 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 FGF1P05230 155 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 FPR1P21462 350 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 DNAJA1P31689 397 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 RPL38P63173 70 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 GPR50Q13585 617 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 SPANXN4Q5MJ08 99 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 NXNL2Q5VZ03 156 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 MSANTD2Q6P1R3 559 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 GRPEL2Q8TAA5 225 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 BRSK1Q8TDC3 778 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 APH1BQ8WW43 257 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 CLIP3Q96DZ5 547 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 HMCESQ96FZ2 354 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 SLA2Q9H6Q3 261 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 SP110Q9HB58 689 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 TXNRD2Q9NNW7 524 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 RIMKLBQ9ULI2 386 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 ABCG2Q9UNQ0 655 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 BTBD3Q9Y2F9 522 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 TIMM13Q9Y5L4 95 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 HS3ST4Q9Y661 456 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms