RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 HSPB11Q9Y547 144 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SPEF2Q9C093 1822 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ANKRD26Q9UPS8 1709 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CLCA1A8K7I4 914 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 RNF225M0QZC1 329 aaPredicted RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 AURKAO14965 403 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ALPPP05187 535 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 HK1P19367 917 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CDKL1Q00532 357 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 DSG2Q14126 1118 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 RAB39AQ14964 217 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 USP41Q3LFD5 358 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PTPN20Q4JDL3 420 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 WSCD1Q658N2 575 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 SLC36A4Q6YBV0 504 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 FAM46DQ8NEK8 389 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 S100PBPQ96BU1 408 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 FERD3LQ96RJ6 166 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 MIPEPQ99797 713 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 NDC1Q9BTX1 674 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 EDARQ9UNE0 448 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 MAP4K5Q9Y4K4 846 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 N6AMT1Q9Y5N5 214 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 SETD1AO15047 1707 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 OR6C75A6NL08 312 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 TBL1XO60907 577 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ITGB1P05556 798 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CBSLP0DN79 551 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 RPS3P23396 243 aaKnown RBP eCLIP6.79□□□□□ -1.322e-6■■□□□ 14
SORT1-209ENST00000538502 CBSP35520 551 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 SPIN4Q56A73 249 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PPP1R26Q5T8A7 1209 aaPredicted RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 LRRC70Q7Z2Q7 622 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CLIP4Q8N3C7 705 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ANKFN1Q8N957 763 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 MFSD2AQ8NA29 543 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 TTLQ8NG68 377 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CYP2W1Q8TAV3 490 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 S100A16Q96FQ6 103 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 EXOC2Q96KP1 924 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 AP1S3Q96PC3 154 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 BPIFA1Q9NP55 256 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 TVP23BQ9NYZ1 205 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 RNF181Q9P0P0 153 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CYTH4Q9UIA0 394 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 NOCTQ9UK39 431 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 IFT52Q9Y366 437 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 C10orf71Q711Q0 1435 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 FXYD6-FXYD2A0A087WZ82 144 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 DUXAA6NLW8 204 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PAGE1O75459 146 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ZNF286BP0CG31 522 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 XRCC1P18887 633 aaPredicted RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 RYKP34925 604 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PBX3P40426 434 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PIGGQ5H8A4 983 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 SUSD6Q92537 303 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ZFP3Q96NJ6 502 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 GPR21Q99679 349 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ZSCAN5AQ9BUG6 496 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 DUSP26Q9BV47 211 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 UCK2Q9BZX2 261 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 FXYD6Q9H0Q3 95 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 TOR3AQ9H497 397 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CCDC86Q9H6F5 360 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 MAGIXQ9H6Y5 334 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 COL20A1Q9P218 1284 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ASB4Q9Y574 426 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ARHGEF28Q8N1W1 1705 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 SPTLC1O15269 473 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 KRT33AO76009 404 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 IL1BP01584 269 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PGAM2P15259 253 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CD40LGP29965 261 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 OR3A3P47888 321 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 OR3A2P47893 321 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 RPL6Q02878 288 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 TARDBPQ13148 414 aaKnown RBP eCLIP6.79□□□□□ -1.322e-7■□□□□ 9.9
SORT1-209ENST00000538502 DUOXA1Q1HG43 343 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 INTS5Q6P9B9 1019 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 VSIG10LQ86VR7 867 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 BRSK1Q8TDC3 778 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CANT1Q8WVQ1 401 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CGREF1Q99674 301 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 MCMBPQ9BTE3 642 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PLEKHA1Q9HB21 404 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 POPDC3Q9HBV1 291 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 MYNNQ9NPC7 610 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 UCKL1Q9NWZ5 548 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 NUFIP1Q9UHK0 495 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 SCP2D1Q9UJQ7 156 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 PLEKHA6Q9Y2H5 1048 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 C12orf71A8MTZ7 269 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 BTBD19C9JJ37 291 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 ERAL1O75616 437 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 KCNA5P22460 613 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 CFL1P23528 166 aaKnown RBP6.79□□□□□ -1.32
SORT1-209ENST00000538502 S100PP25815 95 aa6.79□□□□□ -1.32
SORT1-209ENST00000538502 GRK6P43250 576 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms