RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PPFIBP2Q8ND30 876 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 OR4D9Q8NGE8 314 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 MZB1Q8WU39 189 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 LCN9Q8WX39 176 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 SH3KBP1Q96B97 665 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 PTERQ96BW5 349 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 DEPDC7Q96QD5 511 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 OR2A14Q96R47 310 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 MAP3K3Q99759 626 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 PARD6BQ9BYG5 372 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.68□□□□□ -0.38
CHFR-216ENST00000538235 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 STN1Q9H668 368 aaKnown RBP12.68□□□□□ -0.38
CHFR-216ENST00000538235 OCIAD1Q9NX40 245 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 TAS2R13Q9NYV9 303 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 POMT2Q9UKY4 750 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 SATB2Q9UPW6 733 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 PDE10AQ9Y233 779 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 MSRB2Q9Y3D2 182 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 DMXL2Q8TDJ6 3036 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 KPNA5O15131 536 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 CHRM5P08912 532 aaPredicted RBP12.67□□□□□ -0.38
CHFR-216ENST00000538235 JUPP14923 745 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 UGT2B7P16662 529 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 NDUFS1P28331 727 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 SH3BP2P78314 561 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 PLOD1Q02809 727 aaPredicted RBP12.67□□□□□ -0.38
CHFR-216ENST00000538235 PDAP1Q13442 181 aaKnown RBP12.67□□□□□ -0.38
CHFR-216ENST00000538235 NAB1Q13506 487 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 SLMAPQ14BN4 828 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 PHF19Q5T6S3 580 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 IRGCQ6NXR0 463 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 TRMT10CQ7L0Y3 403 aaKnown RBP12.67□□□□□ -0.38
CHFR-216ENST00000538235 AMIGO1Q86WK6 493 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 AVL9Q8NBF6 648 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 OR2W6PQ8NHA6 318 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 MDM1Q8TC05 714 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 SKA2Q8WVK7 121 aaPredicted RBP12.67□□□□□ -0.38
CHFR-216ENST00000538235 CDKL2Q92772 493 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 LIN37Q96GY3 246 aaPredicted RBP12.67□□□□□ -0.38
CHFR-216ENST00000538235 CYTH2Q99418 400 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 RAB33BQ9H082 229 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 APMAPQ9HDC9 416 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 ASCL3Q9NQ33 180 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 HRASLS2Q9NWW9 162 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 NSMCE4AQ9NXX6 385 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 ACTR10Q9NZ32 417 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 SEMA5BQ9P283 1151 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 EPHA6Q9UF33 1036 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 RAB21Q9UL25 225 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 KLHL20Q9Y2M5 609 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 HEBP2Q9Y5Z4 205 aa12.67□□□□□ -0.38
CHFR-216ENST00000538235 USP24Q9UPU5 2620 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 A0A087WUV0 522 aaPredicted RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 TRABD2BA6NFA1 517 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 POC1B-GALNT4F8VUJ3 575 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 RASGRF2O14827 1237 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 ZBTB14O43829 449 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 CBSLP0DN79 551 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 FGF3P11487 239 aaPredicted RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 ENO3P13929 434 aaPredicted RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 ST6GAL1P15907 406 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 AMD1P17707 334 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 IMPA1P29218 277 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 CBSP35520 551 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 HSD17B3P37058 310 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 SKIV2L2P42285 1042 aaKnown RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 KCNC1P48547 511 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 SEPHS1P49903 392 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 USP10Q14694 798 aaKnown RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 KCNAB1Q14722 419 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 OR4D1Q15615 310 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 C18orf21Q32NC0 220 aaPredicted RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 TTLL9Q3SXZ7 439 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 GRTP1Q5TC63 336 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 MROH9Q5TGP6 573 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 PRSS42Q7Z5A4 293 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 PLD6Q8N2A8 252 aaKnown RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 GALNT15Q8N3T1 639 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 OR2L8Q8NGY9 312 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 WDR48Q8TAF3 677 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 ZNF480Q8WV37 535 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 ZFPM2Q8WW38 1151 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 ISL2Q96A47 359 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 AHCYL2Q96HN2 611 aaKnown RBP12.66□□□□□ -0.38
CHFR-216ENST00000538235 PKNOX2Q96KN3 472 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 UBXN10Q96LJ8 280 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 PITPNM3Q9BZ71 974 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 SRMSQ9H3Y6 488 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 SNX15Q9NRS6 342 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 ZNF358Q9NW07 568 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 ANGPTL2Q9UKU9 493 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 LOXL2Q9Y4K0 774 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 COLEC10Q9Y6Z7 277 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 CCDC88CQ9P219 2028 aa12.66□□□□□ -0.38
CHFR-216ENST00000538235 ZZEF1O43149 2961 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 CCDC187A0A096LP49 1063 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 IGKV1-8A0A0C4DH67 115 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms