RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CSN2P05814 226 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 NR2F6P10588 404 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 IDH3AP50213 366 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 RPP38P78345 283 aaKnown RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TXNL4AP83876 142 aaKnown RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 DENND5AQ6IQ26 1287 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 C12orf76Q8N812 135 aaPredicted RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 OR4C6Q8NH72 309 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SORCS3Q9UPU3 1222 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ELOA3DA6NLF2 546 aaPredicted RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ARHGEF33A8MVX0 844 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 PLIN3O60664 434 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 LINGO3P0C6S8 592 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TCF4P15884 667 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 CBX3Q13185 183 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 RIN1Q13671 783 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ELOA3BQ3SY89 546 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 PDE12Q6L8Q7 609 aaKnown RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 CERS6Q6ZMG9 384 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SLC29A4Q7RTT9 530 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 FAM47BQ8NA70 645 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ELOA3Q8NG57 546 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 OVCA2Q8WZ82 227 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 BADQ92934 168 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 CCM2Q9BSQ5 444 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TBL1XR1Q9BZK7 514 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 LEFTY2O00292 366 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TULP2O00295 520 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 CDC123O75794 336 aaPredicted RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 PAPSS2O95340 614 aaPredicted RBP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 RPS6KA3P51812 740 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 LIMK2P53671 638 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 LCP2Q13094 533 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TARDBPQ13148 414 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00346-201ENST00000538077 ODF4Q2M2E3 257 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 FAM174BQ3ZCQ3 159 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 TPGS2Q68CL5 300 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 OR2T34Q8NGX1 318 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 OR2T3Q8NH03 318 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 PCDH19Q8TAB3 1148 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SHDQ96IW2 340 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 SLC2A6Q9UGQ3 507 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 NOX1Q9Y5S8 564 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 BCL9LQ86UU0 1499 aa10.99□□□□□ -0.65
LINC00346-201ENST00000538077 CAPZA1P52907 286 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 SLC10A7Q0GE19 358 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 NXPE1Q8N323 547 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 RNF186Q9NXI6 227 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 TVP23BQ9NYZ1 205 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 HS3ST4Q9Y661 456 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 EDDM13A0A1B0GTR0 161 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ERI3O43414 337 aaKnown RBP10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ACADLP28330 430 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 IL12AP29459 219 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 CSTF2P33240 577 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00346-201ENST00000538077 PTGER3P43115 390 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 LRP8Q14114 963 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 HEPACAMQ14CZ8 416 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 CARTPTQ16568 116 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 PRRT3Q5FWE3 981 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF611Q8N823 705 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 LPGAT1Q92604 370 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 NMUR2Q9GZQ4 415 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 MALT1Q9UDY8 824 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 GNEQ9Y223 722 aaKnown RBP10.98□□□□□ -0.65
LINC00346-201ENST00000538077 REM1O75628 298 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 VIPR1P32241 457 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 SCARB2Q14108 478 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF627Q7L945 461 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 TRIM74Q86UV6 250 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 AMER2Q8N7J2 671 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 MTMR14Q8NCE2 650 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF296Q8WUU4 475 aaPredicted RBP10.98□□□□□ -0.65
LINC00346-201ENST00000538077 CHID1Q9BWS9 393 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 OSBPL11Q9BXB4 747 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 CLK4Q9HAZ1 481 aaKnown RBP10.98□□□□□ -0.65
LINC00346-201ENST00000538077 POLE3Q9NRF9 147 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 PNPLA3Q9NST1 481 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 GIN1Q9NXP7 522 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 MOCS1Q9NZB8 636 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 DTLQ9NZJ0 730 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 IRAK3Q9Y616 596 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 TCRBV7S3A2A0A539 114 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 SMAD9O15198 467 aaKnown RBP10.98□□□□□ -0.65
LINC00346-201ENST00000538077 GADD45GO95257 159 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 CXCR1P25024 350 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ANKRD26P1Q6NSI1 321 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 FBXL22Q6P050 247 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 CCDC54Q8NEL0 328 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 WFIKKN2Q8TEU8 576 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 HTRA1Q92743 480 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 COMMD4Q9H0A8 199 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00346-201ENST00000538077 PCBD2Q9H0N5 130 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ADAM7Q9H2U9 754 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 DKKL1Q9UK85 242 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF726A6NNF4 738 aa10.98□□□□□ -0.65
LINC00346-201ENST00000538077 SNUPNO95149 360 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms