RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TEX264Q9Y6I9 313 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SPTA1P02549 2419 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GSAPA4D1B5 854 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 F8W8V4 182 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GPC4O75487 556 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TPBGLP0DKB5 382 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CDH3P22223 829 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ARL4DP49703 201 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ACY1Q03154 408 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ANKRD20A4Q4UJ75 823 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SYTL3Q4VX76 610 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PWWP2BQ6NUJ5 590 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CYB5D1Q6P9G0 228 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TBC1D21Q8IYX1 336 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SLC22A15Q8IZD6 547 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 KRT222Q8N1A0 295 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 OR5K2Q8NHB8 316 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 LNPEPQ9UIQ6 1025 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SLC9B1P1A6NJY1 282 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GOLGA8KD6RF30 607 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GOLGA8TH3BQL2 631 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 VAPBO95292 243 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 F8A1P23610 371 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 HSPA14Q0VDF9 509 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 KIAA0930Q6ICG6 404 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 C6orf15Q6UXA7 325 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 BPHLQ86WA6 291 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ANKMY2Q8IV38 441 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZNF843Q8N446 348 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 FBXO36Q8NEA4 188 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PYROXD1Q8WU10 500 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 KIAA1143Q96AT1 154 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 FCRL4Q96PJ5 515 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TRIM56Q9BRZ2 755 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PITPNM3Q9BZ71 974 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 NFU1Q9UMS0 254 aa17.31■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZNF462Q96JM2 2506 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ST6GAL1P15907 406 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 RPS3P23396 243 aaKnown RBP eCLIP17.3■□□□□ 0.361e-7■■□□□ 12.8
TNFRSF1A-209ENST00000536717 AOAHP28039 575 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 FASTKD3Q14CZ7 662 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GPR19Q15760 415 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TBR1Q16650 682 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SPANXN3Q5MJ09 141 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 UNC5AQ6ZN44 842 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 IGDCC3Q8IVU1 814 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 EXD3Q8N9H8 876 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 EIF1ADQ8N9N8 165 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ASZ1Q8WWH4 475 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZNF501Q96CX3 271 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CFAP36Q96G28 342 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 EFHD1Q9BUP0 239 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TSSK1BQ9BXA7 367 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TWSG1Q9GZX9 223 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ANKZF1Q9H8Y5 726 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SOHLH2Q9NX45 425 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ACTR10Q9NZ32 417 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 FAM169AQ9Y6X4 670 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 V9GYY5 206 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ANKRD12Q6UB98 2062 aa17.3■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZCWPW2A0A1B0GU75 182 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZNF891A8MT65 544 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 C2orf74A8MZ97 194 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TERTO14746 1132 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 NKX2-8O15522 239 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 NDUFS3O75489 264 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ECHS1P30084 290 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SHMT2P34897 504 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CRYMQ14894 314 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TYSND1Q2T9J0 566 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CTSL3PQ5NE16 218 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PALM2Q8IXS6 379 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 MED8Q96G25 268 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TRAPPC9Q96Q05 1148 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 POLG2Q9UHN1 485 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GNPTGQ9UJJ9 305 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CROTQ9UKG9 612 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PLAGL1Q9UM63 463 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TDRKHQ9Y2W6 561 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 MRPS18BQ9Y676 258 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 HELZ2Q9BYK8 2649 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 HEATR5BQ9P2D3 2071 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 MED13Q9UHV7 2174 aa17.29■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PIPSLA2A3N6 862 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SLCO2B1O94956 709 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 NTRK1P04629 796 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PVRP15151 417 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 DLSTP36957 453 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 MAGEA4P43358 317 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 EIF3BP55884 814 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 C19orf57Q0VDD7 668 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 LONRF1Q17RB8 773 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ERCC6LQ2NKX8 1250 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TMTC4Q5T4D3 741 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PTRHD1Q6GMV3 140 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 MRNIPQ6NTE8 343 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 LRRC6Q86X45 466 aa17.28■□□□□ 0.36
TNFRSF1A-209ENST00000536717 OTUD6BQ8N6M0 293 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms