RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 LCN10Q6JVE6 187 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 RAB43Q86YS6 212 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 DCUN1D3Q8IWE4 304 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 TRIM58Q8NG06 486 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 PANX3Q96QZ0 392 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 RAB11FIP5Q9BXF6 653 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 TRIM55Q9BYV6 548 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 MRM3Q9HC36 420 aaKnown RBP12.72□□□□□ -0.37
MRPS35-202ENST00000536569 ENAMQ9NRM1 1142 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 TREX1Q9NSU2 369 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 CATSPERZQ9NTU4 200 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 BFARQ9NZS9 450 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 PLCL2Q9UPR0 1127 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 CDYLQ9Y232 598 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 ZNF451Q9Y4E5 1061 aa12.72□□□□□ -0.37
MRPS35-202ENST00000536569 ARGFXA6NJG6 315 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 ISM1B1AKI9 464 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 K7EM74 188 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 PFDN6O15212 129 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 CD3EAPO15446 510 aaKnown RBP12.71□□□□□ -0.37
MRPS35-202ENST00000536569 ZSCAN9O15535 394 aaPredicted RBP12.71□□□□□ -0.37
MRPS35-202ENST00000536569 KLHL41O60662 606 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 TMEM63AO94886 807 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 S1PR4O95977 384 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 ETS1P14921 441 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 RPS3P23396 243 aaKnown RBP eCLIP12.71□□□□□ -0.37
MRPS35-202ENST00000536569 PKLRP30613 574 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 PTGIRP43119 386 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 DCDP81605 110 aaKnown RBP12.71□□□□□ -0.37
MRPS35-202ENST00000536569 HSPA14Q0VDF9 509 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 SSPNQ14714 243 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 ZIC1Q15915 447 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 TTC23LQ6PF05 361 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 MICALCLQ6ZW33 695 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 ATCAYQ86WG3 371 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 DNAJC22Q8N4W6 341 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 GLIS1Q8NBF1 620 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 GSDMBQ8TAX9 411 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 MIB2Q96AX9 1013 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 NACC2Q96BF6 587 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 NRTNQ99748 197 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 MENTQ9BUN1 341 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 FAM60AQ9NP50 221 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 CHRAC1Q9NRG0 131 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 INTS7Q9NVH2 962 aaKnown RBP12.71□□□□□ -0.37
MRPS35-202ENST00000536569 SPHK1Q9NYA1 384 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 GNPTGQ9UJJ9 305 aa12.71□□□□□ -0.37
MRPS35-202ENST00000536569 CLEC18AA5D8T8 446 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 KLF7O75840 302 aaPredicted RBP12.7□□□□□ -0.38
MRPS35-202ENST00000536569 DNAJB5O75953 348 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 TPSB2P20231 275 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 NR1D1P20393 614 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 CD9P21926 228 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 VARSP26640 1264 aaKnown RBP12.7□□□□□ -0.38
MRPS35-202ENST00000536569 CCL11P51671 97 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 UBAP2LQ14157 1087 aaKnown RBP12.7□□□□□ -0.38
MRPS35-202ENST00000536569 SEMA3AQ14563 771 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 TPSAB1Q15661 275 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 IGFBP7Q16270 282 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 PTCHD3Q3KNS1 767 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 RNF187Q5TA31 235 aaPredicted RBP12.7□□□□□ -0.38
MRPS35-202ENST00000536569 YOD1Q5VVQ6 348 aaPredicted RBP12.7□□□□□ -0.38
MRPS35-202ENST00000536569 CPZQ66K79 652 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 PTRHD1Q6GMV3 140 aaKnown RBP12.7□□□□□ -0.38
MRPS35-202ENST00000536569 LRRC8BQ6P9F7 803 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 CLEC18BQ6UXF7 455 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 NAPRTQ6XQN6 538 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 GSTA5Q7RTV2 222 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 RAB42Q8N4Z0 105 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 ZBTB2Q8N680 514 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 CLEC18CQ8NCF0 446 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 OR2L8Q8NGY9 312 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 DLG3Q92796 817 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 GBP5Q96PP8 586 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 TCF12Q99081 682 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 KIFC1Q9BW19 673 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 KLHL25Q9H0H3 589 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 P2RY12Q9H244 342 aa12.7□□□□□ -0.38
MRPS35-202ENST00000536569 GPN3Q9UHW5 284 aaPredicted RBP12.7□□□□□ -0.38
MRPS35-202ENST00000536569 SEC16AO15027 2179 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 TARM1B6A8C7 271 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 H3BMM5 538 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 RASGRF2O14827 1237 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 DPM1O60762 260 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 NDUFS3O75489 264 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 FGGP02679 453 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 PDGFAP04085 211 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 ZSCAN5DPP0CG00 497 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 PEBP1P30086 187 aaKnown RBP12.69□□□□□ -0.38
MRPS35-202ENST00000536569 CCNFP41002 786 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 ARSFP54793 590 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 ADARP55265 1226 aaKnown RBP12.69□□□□□ -0.38
MRPS35-202ENST00000536569 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
MRPS35-202ENST00000536569 BASP1P80723 227 aaKnown RBP12.69□□□□□ -0.38
MRPS35-202ENST00000536569 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
MRPS35-202ENST00000536569 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
MRPS35-202ENST00000536569 COLEC12Q5KU26 742 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 MRNIPQ6NTE8 343 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 OTOAQ7RTW8 1153 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 SDCCAG8Q86SQ7 713 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms