RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CHMP2BQ9UQN3 213 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 PIPSLA2A3N6 862 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 EFCAB8A8MWE9 144 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 C2orf74A8MZ97 194 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 H3BMM5 538 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 MATN2O00339 956 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 HCRTR1O43613 425 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 C1orf105O95561 183 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 CTSBP07858 339 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 F8A1P23610 371 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 GABRB3P28472 473 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 ATP1A2P50993 1020 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 ACY1Q03154 408 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 CUL1Q13616 776 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 KYNUQ16719 465 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRKDC-206ENST00000536429 TRMT10BQ6PF06 316 aaKnown RBP12.73□□□□□ -0.37
PRKDC-206ENST00000536429 SPESP1Q6UW49 350 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 UNC5DQ6UXZ4 953 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 PPP1R3BQ86XI6 285 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 ZBTB2Q8N680 514 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 SKA2Q8WVK7 121 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-206ENST00000536429 ZNF501Q96CX3 271 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-206ENST00000536429 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-206ENST00000536429 DPH5Q9H2P9 285 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 AKIRIN1Q9H9L7 192 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-206ENST00000536429 FAM60AQ9NP50 221 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 OR6C2Q9NZP2 312 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 IL17BQ9UHF5 180 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 LNPEPQ9UIQ6 1025 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 RARRES3Q9UL19 164 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 KLHL20Q9Y2M5 609 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 TEX264Q9Y6I9 313 aa12.73□□□□□ -0.37
PRKDC-206ENST00000536429 PFDN6O15212 129 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 NTRK1P04629 796 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 MAP4P27816 1152 aaKnown RBP12.72□□□□□ -0.37
PRKDC-206ENST00000536429 STAT5AP42229 794 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 RAB28P51157 221 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 PGGT1BP53609 377 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 TUBB4BP68371 445 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 TIAL1Q01085 375 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRKDC-206ENST00000536429 TUBB2AQ13885 445 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 HIF1AQ16665 826 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.72□□□□□ -0.37
PRKDC-206ENST00000536429 SPANXN3Q5MJ09 141 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 C6orf15Q6UXA7 325 aaPredicted RBP12.72□□□□□ -0.37
PRKDC-206ENST00000536429 CDHR3Q6ZTQ4 885 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 ANKMY2Q8IV38 441 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 CARFQ8N187 725 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 C2CD4AQ8NCU7 369 aaPredicted RBP12.72□□□□□ -0.37
PRKDC-206ENST00000536429 OR1L3Q8NH93 324 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 DENND1AQ8TEH3 1009 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 TTC9Q92623 222 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 NDNQ99608 321 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 FAM167BQ9BTA0 163 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 TUBB2BQ9BVA1 445 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 PDE7BQ9NP56 450 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 LATS2Q9NRM7 1088 aa12.72□□□□□ -0.37
PRKDC-206ENST00000536429 MRPS18BQ9Y676 258 aaKnown RBP12.72□□□□□ -0.37
PRKDC-206ENST00000536429 ARHGEF33A8MVX0 844 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 ISM1B1AKI9 464 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 E5RI56 91 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 RASGRF2O14827 1237 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 KPNA5O15131 536 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 MATN4O95460 622 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 TTC4O95801 387 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 CD9P21926 228 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 CARSP49589 748 aaKnown RBP12.71□□□□□ -0.37
PRKDC-206ENST00000536429 ARL4CP56559 192 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 TRADDQ15628 312 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 KLHL38Q2WGJ6 581 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 DEFB110Q30KQ9 67 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 RBM20Q5T481 1227 aaKnown RBP12.71□□□□□ -0.37
PRKDC-206ENST00000536429 TEDDM1Q5T9Z0 273 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 STEAP4Q687X5 459 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 CNTN4Q8IWV2 1026 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 LMNTD2Q8IXW0 634 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 ESX1Q8N693 406 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 C19orf47Q8N9M1 422 aaKnown RBP12.71□□□□□ -0.37
PRKDC-206ENST00000536429 SLC38A9Q8NBW4 561 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 GSDMBQ8TAX9 411 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 CD200R1Q8TD46 325 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 CALML6Q8TD86 181 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 KCNJ9Q92806 393 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 CERS2Q96G23 380 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 RUFY1Q96T51 708 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 GPR21Q99679 349 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 ERP44Q9BS26 406 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 AARSD1Q9BTE6 412 aaKnown RBP12.71□□□□□ -0.37
PRKDC-206ENST00000536429 SLC12A9Q9BXP2 914 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 GRHL1Q9NZI5 618 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 ZC3H7BQ9UGR2 993 aaKnown RBP12.71□□□□□ -0.37
PRKDC-206ENST00000536429 CROTQ9UKG9 612 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 VPS9D1Q9Y2B5 631 aa12.71□□□□□ -0.37
PRKDC-206ENST00000536429 PIEZO2Q9H5I5 2752 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 A0A0J9YY10 115 aa12.7□□□□□ -0.38
PRKDC-206ENST00000536429 FAM187AA6NFU0 413 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms