RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CCDC110Q8TBZ0 833 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PPP4R1Q8TF05 950 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SPATA13Q96N96 652 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 AGAP4Q96P64 663 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TTC1Q99614 292 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NRTNQ99748 197 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 GORASP1Q9BQQ3 440 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CHRNA10Q9GZZ6 450 aa12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NOVA2Q9UNW9 492 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-207ENST00000535958 A0A1B0GX78 115 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 RPN2P04844 631 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ITGAXP20702 1163 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CDKN1CP49918 316 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 HADHBP55084 474 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CDC16Q13042 620 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SPARCL1Q14515 664 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 KIR2DS3Q14952 304 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 RBBP7Q16576 425 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PRAMEF13Q5VWM6 474 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MRPL14Q6P1L8 145 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TTLL10Q6ZVT0 673 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TICAM1Q8IUC6 712 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 VSTM4Q8IW00 320 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TTC29Q8NA56 475 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 OR5K2Q8NHB8 316 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 DNAJB14Q8TBM8 379 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NACC2Q96BF6 587 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 OR2A14Q96R47 310 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 RANBP9Q96S59 729 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TSSK1BQ9BXA7 367 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 RUBCNLQ9H714 662 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 LRRC40Q9H9A6 602 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MRM3Q9HC36 420 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 INTS7Q9NVH2 962 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NLE1Q9NVX2 485 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FBXL4Q9UKA2 621 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PLAGL1Q9UM63 463 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 OSGIN2Q9Y236 505 aa12.49□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PCSK5Q92824 1860 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CENPEQ02224 2701 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TRBV5-4A0A0C4DH59 114 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 AKR1B15C9JRZ8 316 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 H7C0S8 307 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PJA2O43164 708 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 LRRTM2O43300 516 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 AP2A1O95782 977 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 GAS8O95995 478 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 UMODP07911 640 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 PRSS56P0CW18 603 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MMP11P24347 488 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MSNP26038 577 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NAP1L1P55209 391 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SOX8P57073 446 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ITIH4Q14624 930 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 POU6F1Q14863 301 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ZNF169Q14929 603 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SPA17Q15506 151 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ZIC1Q15915 447 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 DBN1Q16643 649 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 HIF1AQ16665 826 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TUBB8Q3ZCM7 444 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SRRM1Q8IYB3 904 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 STYXQ8WUJ0 223 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 INPP5DQ92835 1189 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FAM118BQ9BPY3 351 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SLC6A20Q9NP91 592 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 SPHK1Q9NYA1 384 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 EURLQ9NYK6 297 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NXT1Q9UKK6 140 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 NUP210LQ5VU65 1888 aa12.48□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ARHGAP10A1A4S6 786 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 GOLGA6L9A6NEM1 432 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MASP2O00187 686 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 HNRNPRO43390 633 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TJP3O95049 919 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ALBP02768 609 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 EDN3P14138 238 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MAGP20916 626 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TSFMP43897 325 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 GABRA4P48169 554 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 RAB28P51157 221 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CSE1LP55060 971 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 FOXL2P58012 376 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 TLR1Q15399 786 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 P3H1Q32P28 736 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ZNF658BQ4V348 819 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 ZC3H12BQ5HYM0 836 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 C1QL3Q5VWW1 255 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 B3GNTL1Q67FW5 361 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 KRT35Q92764 455 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 CDKN2AIPNLQ96HQ2 116 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 MAGEB10Q96LZ2 347 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
TNFRSF1A-207ENST00000535958 LHPPQ9H008 270 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms