RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PRDX3P30048 256 aaKnown RBP22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 CBSP35520 551 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 CCNFP41002 786 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 SKIV2L2P42285 1042 aaKnown RBP22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 RAB28P51157 221 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 FBXO38Q6PIJ6 1188 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 CARFQ8N187 725 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 LINC01555Q8NAE3 123 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 IFT81Q8WYA0 676 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 RAD51AP1Q96B01 352 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 IL17FQ96PD4 163 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 FBXO8Q9NRD0 319 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 NSMCE4AQ9NXX6 385 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 SPHK1Q9NYA1 384 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 MTRF1LQ9UGC7 380 aaKnown RBP22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 ACSL6Q9UKU0 697 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 VWA7Q9Y334 891 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 CELSR3Q9NYQ7 3312 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 URB1O60287 2271 aaKnown RBP22■■□□□ 1.11
SFSWAP-204ENST00000535399 ANKRD11Q6UB99 2663 aaPredicted RBP22■■□□□ 1.11
SFSWAP-204ENST00000535399 PIPSLA2A3N6 862 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 KRT87PA6NCN2 255 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 SRRM3A6NNA2 597 aaPredicted RBP22■■□□□ 1.11
SFSWAP-204ENST00000535399 ARHGEF33A8MVX0 844 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 EIF3FO00303 357 aaPredicted RBP22■■□□□ 1.11
SFSWAP-204ENST00000535399 FDXRP22570 491 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 PEBP1P30086 187 aaKnown RBP22■■□□□ 1.11
SFSWAP-204ENST00000535399 PCBP4P57723 403 aaKnown RBP22■■□□□ 1.11
SFSWAP-204ENST00000535399 SH3BP2P78314 561 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 EEF1AKMT2Q5JPI9 291 aaKnown RBP22■■□□□ 1.11
SFSWAP-204ENST00000535399 FAM45BPQ6NSW5 357 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 TTC23LQ6PF05 361 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 PAQR3Q6TCH7 311 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 KMT5CQ86Y97 462 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 LMNTD1Q8N9Z9 388 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 FLVCR1-AS1Q8TAF5 88 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 FAM45AQ8TCE6 357 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 ASB11Q8WXH4 323 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 OLFM1Q99784 485 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 DDA1Q9BW61 102 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 PITPNM3Q9BZ71 974 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 C1GALT1Q9NS00 363 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 B3GALT1Q9Y5Z6 326 aa22■■□□□ 1.11
SFSWAP-204ENST00000535399 RASGRF2O14827 1237 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 ZNF500O60304 480 aaPredicted RBP21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 EIF2S3P41091 472 aaKnown RBP21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 PGGT1BP53609 377 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 RAB15P59190 212 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 ANKS6Q68DC2 871 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 PIWIL4Q7Z3Z4 852 aaKnown RBP21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 RELL1Q8IUW5 271 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 OR2L8Q8NGY9 312 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 MAGEC3Q8TD91 643 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 DENND1AQ8TEH3 1009 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 CDKL2Q92772 493 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 OR2A14Q96R47 310 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 RHOJQ9H4E5 214 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 APMAPQ9HDC9 416 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 AHCTF1Q8WYP5 2266 aa21.99■■□□□ 1.11
SFSWAP-204ENST00000535399 GFYI3L273 518 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 SPAG6O75602 509 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 ZBTB11O95625 1053 aaPredicted RBP21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 CATP04040 527 aaKnown RBP21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 FOLR1P15328 257 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 UGT2B7P16662 529 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 CDH3P22223 829 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 KCNAB1Q14722 419 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 KIR2DS3Q14952 304 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 TMEM164Q5U3C3 297 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 SPESP1Q6UW49 350 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 CEP128Q6ZU80 1094 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 D2HGDHQ8N465 521 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 C2orf73Q8N5S3 287 aaPredicted RBP21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 FBF1Q8TES7 1133 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 EEF1AKMT1Q8WVE0 214 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 ELMO2Q96JJ3 720 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 FMO2Q99518 471 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 CTRCQ99895 268 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 RAB11FIP5Q9BXF6 653 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 SLC39A10Q9ULF5 831 aa21.98■■□□□ 1.11
SFSWAP-204ENST00000535399 A0A087WV48 116 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 FAM95CA0A1B0GW59 222 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 SLC9B1P1A6NJY1 282 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 MYO1CO00159 1063 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 TSPAN12O95859 305 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 RHOXF2BP0C7M4 288 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 ST6GAL1P15907 406 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 STX2P32856 288 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 RGS4P49798 205 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 HSD11B2P80365 405 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 KBTBD12Q3ZCT8 623 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 DCAF12Q5T6F0 453 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 UBAP2Q5T6F2 1119 aaKnown RBP21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 TRIM73Q86UV7 250 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 FBXO15Q8NCQ5 510 aaPredicted RBP21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 ZNF248Q8NDW4 579 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 OR9A1PQ8NGU1 263 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 VPS39Q96JC1 886 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 TRAPPC9Q96Q05 1148 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 CPNE1Q99829 537 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms