RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 KLHL17Q6TDP4 642 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 ERMP1Q7Z2K6 904 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 ZNF438Q7Z4V0 828 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 RAB43Q86YS6 212 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 CEP97Q8IW35 865 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 BBS7Q8IWZ6 715 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 PGAM4Q8N0Y7 254 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 OR13J1Q8NGT2 312 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 ZNF669Q96BR6 464 aaPredicted RBP8.86□□□□□ -0.99
SF3B2-216ENST00000534765 C17orf62Q9BQA9 187 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 FEM1AQ9BSK4 669 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 ATP13A1Q9HD20 1204 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 PRDM8Q9NQV8 689 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 TMEM216Q9P0N5 145 aa8.86□□□□□ -0.99
SF3B2-216ENST00000534765 MYO9BQ13459 2157 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 COL4A3Q01955 1670 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 GRM6O15303 877 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CCL16O15467 120 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 INSIG1O15503 277 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SMAD6O43541 496 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 KATNA1O75449 491 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 PGLSO95336 258 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 PIGNO95427 931 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 GSTM1P09488 218 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 DHRS4L1P0CG22 281 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CENPAP49450 140 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 NRG1Q02297 640 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SNTA1Q13424 505 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CCNYL2Q5T2Q4 361 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SFTPA1Q8IWL2 248 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 APCDD1Q8J025 514 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 EXT2Q93063 718 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 MUS81Q96NY9 551 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TRIM15Q9C019 465 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TMEM9Q9P0T7 183 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 MARCH4Q9P2E8 410 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SLCO3A1Q9UIG8 710 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 WWP2O00308 870 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 RECQL5O94762 991 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 INMTO95050 263 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 FKBP9O95302 570 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CCNYL3P0C7X3 344 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TIAL1Q01085 375 aaKnown RBP eCLIP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 PUDPQ08623 228 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SYT16Q17RD7 645 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 INSCQ1MX18 579 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CYP27C1Q4G0S4 372 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 PLPP4Q5VZY2 271 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 R3HCC1LQ7Z5L2 792 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 C7orf61Q8IZ16 206 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CPA6Q8N4T0 437 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 OR6K2Q8NGY2 324 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 FAM110BQ8TC76 370 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TMEM169Q96HH4 297 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ZNF597Q96LX8 424 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SLC46A2Q9BY10 475 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CLPBQ9H078 707 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SP110Q9HB58 689 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SSU72Q9NP77 194 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ATP13A2Q9NQ11 1180 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 HPS4Q9NQG7 708 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 EIF2B3Q9NR50 452 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SMPD3Q9NY59 655 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CFL2Q9Y281 166 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ARL5AQ9Y689 179 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 KIF26AQ9ULI4 1882 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ATP6AP2A0A1C7CYW4 349 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ERVH48-1M5A8F1 160 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 NR5A2O00482 541 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 AREL1O15033 823 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 GLRA3O75311 464 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ZNF821O75541 412 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ATP6AP2O75787 350 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 BCAS2O75934 225 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 PIM1P11309 404 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 EPCAMP16422 314 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CAPGP40121 348 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CAPZA2P47755 286 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 GDI2P50395 445 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TMBIM6P55061 237 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 RAB14P61106 215 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CBX2Q14781 532 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ACAP2Q15057 778 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 RPS27LQ71UM5 84 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TIGD4Q8IY51 512 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TEX26Q8N6G2 289 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ANKRD49Q8WVL7 239 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 CLP1Q92989 425 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 MTERF3Q96E29 417 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 ALG14Q96F25 216 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 IMP4Q96G21 291 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 FYTTD1Q96QD9 318 aaKnown RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 MCOLN1Q9GZU1 580 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 TASP1Q9H6P5 420 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 RANGRFQ9HD47 186 aaPredicted RBP8.85□□□□□ -0.99
SF3B2-216ENST00000534765 IL23AQ9NPF7 189 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 SPG21Q9NZD8 308 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 EMC3Q9P0I2 261 aa8.85□□□□□ -0.99
SF3B2-216ENST00000534765 LOC110117498-PIK3R3F6TDL0 507 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms