RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 FAM60AQ9NP50 221 aa13.59□□□□□ -0.23
SF3B2-215ENST00000534307 ANAPC5Q9UJX4 755 aa13.59□□□□□ -0.23
SF3B2-215ENST00000534307 KCNMB2Q9Y691 235 aa13.59□□□□□ -0.23
SF3B2-215ENST00000534307 TMEM150CB9EJG8 249 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 HCRTR1O43613 425 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 KATNA1O75449 491 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 CREG1O75629 220 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 VAPBO95292 243 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 KRT14P02533 472 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 PTPN4P29074 926 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 COILP38432 576 aaPredicted RBP13.58□□□□□ -0.24
SF3B2-215ENST00000534307 VPS41P49754 854 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 CSE1LP55060 971 aaKnown RBP13.58□□□□□ -0.24
SF3B2-215ENST00000534307 ERV3-1Q14264 604 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 KYNUQ16719 465 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 CTSL3PQ5NE16 218 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 IZUMO3Q5VZ72 239 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 KIAA0930Q6ICG6 404 aaPredicted RBP13.58□□□□□ -0.24
SF3B2-215ENST00000534307 LCN10Q6JVE6 187 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 UNC5DQ6UXZ4 953 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 TMEM135Q86UB9 458 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 LRRC6Q86X45 466 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 DSELQ8IZU8 1212 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 C19orf47Q8N9M1 422 aaKnown RBP13.58□□□□□ -0.24
SF3B2-215ENST00000534307 LINC01555Q8NAE3 123 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 LPGAT1Q92604 370 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 MAGOHBQ96A72 148 aaKnown RBP13.58□□□□□ -0.24
SF3B2-215ENST00000534307 TSSK1BQ9BXA7 367 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 KLHL25Q9H0H3 589 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 PCMTD2Q9NV79 361 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 GNPTGQ9UJJ9 305 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 PLAGL1Q9UM63 463 aa13.58□□□□□ -0.24
SF3B2-215ENST00000534307 TDRKHQ9Y2W6 561 aaKnown RBP13.58□□□□□ -0.24
SF3B2-215ENST00000534307 FER1L5A0AVI2 2057 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 SEC16AO15027 2179 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 GOLGA8KD6RF30 607 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 GOLGA8TH3BQL2 631 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 MEN1O00255 615 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 PGRMC1O00264 195 aaKnown RBP13.57□□□□□ -0.24
SF3B2-215ENST00000534307 APOA4P06727 396 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 CAPN1P07384 714 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 MLNP12872 115 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 MAGEA3P43357 314 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 RAB28P51157 221 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 ADARP55265 1226 aaKnown RBP13.57□□□□□ -0.24
SF3B2-215ENST00000534307 RPS18P62269 152 aaKnown RBP13.57□□□□□ -0.24
SF3B2-215ENST00000534307 TLE1Q04724 770 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 GBX1Q14549 363 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 KIR2DS3Q14952 304 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 SLC5A12Q1EHB4 618 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 PTRHD1Q6GMV3 140 aaKnown RBP13.57□□□□□ -0.24
SF3B2-215ENST00000534307 DCUN1D3Q8IWE4 304 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 SLC35F6Q8N357 371 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 MCUQ8NE86 351 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 ACTRT1Q8TDG2 376 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 TCTN2Q96GX1 697 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 PANX3Q96QZ0 392 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 OSBPL9Q96SU4 736 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 TRIM56Q9BRZ2 755 aaKnown RBP13.57□□□□□ -0.24
SF3B2-215ENST00000534307 CHST8Q9H2A9 424 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 POLHQ9Y253 713 aa13.57□□□□□ -0.24
SF3B2-215ENST00000534307 A0A0J9YY10 115 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 NDUFS3O75489 264 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 RPN2P04844 631 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 CYP2A7P20853 494 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 TERF1P54274 439 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 ITGA1P56199 1179 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 UBAP2LQ14157 1087 aaKnown RBP13.56□□□□□ -0.24
SF3B2-215ENST00000534307 TMED2Q15363 201 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 RNF187Q5TA31 235 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-215ENST00000534307 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-215ENST00000534307 MRNIPQ6NTE8 343 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 CCDC137Q6PK04 289 aaKnown RBP13.56□□□□□ -0.24
SF3B2-215ENST00000534307 FAM198BQ6UWH4 519 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 CENPUQ71F23 418 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 SYVN1Q86TM6 617 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 CILP2Q8IUL8 1156 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 AGGF1Q8N302 714 aaeCLIP13.56□□□□□ -0.24
SF3B2-215ENST00000534307 MR1Q95460 341 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 PDLIM2Q96JY6 352 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 SERPINB12Q96P63 405 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 TCF12Q99081 682 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 NAP1L3Q99457 506 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-215ENST00000534307 ACTR5Q9H9F9 607 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-215ENST00000534307 SERTAD3Q9UJW9 196 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 CACNA1DQ01668 2161 aa13.56□□□□□ -0.24
SF3B2-215ENST00000534307 ZCWPW2A0A1B0GU75 182 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 FAM237BA0A1B0GVD1 139 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CDC14CA4D256 554 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CLEC18AA5D8T8 446 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CES2O00748 559 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 KPNA5O15131 536 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 MAP3K7O43318 606 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 PRICKLE3O43900 615 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-215ENST00000534307 KDM1AO60341 852 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 PHF2O75151 1096 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 KLK3P07288 261 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-215ENST00000534307 CTSBP07858 339 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 RAB40ALP0C0E4 278 aa13.55□□□□□ -0.24
SF3B2-215ENST00000534307 OGNP20774 298 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms