RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	LARS	Q9P2J5	1176 aa	Known RBP	4.54	□□□□□ -1.68
ATM-223	ENST00000533979	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.54	□□□□□ -1.68
ATM-223	ENST00000533979	EXTL2	Q9UBQ6	330 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	SNX7	Q9UNH6	387 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	CLIC4	Q9Y696	253 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	CLCA3P	Q9Y6N3	262 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	COL16A1	Q07092	1604 aa	Predicted RBP	4.54	□□□□□ -1.68
ATM-223	ENST00000533979	STRCP1	A6NGW2	1772 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	ACE	P12821	1306 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	YDJC	A8MPS7	323 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	ATP2A1	O14983	1001 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	ST8SIA3	O43173	380 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	KLK8	O60259	260 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	PEX11A	O75192	247 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	CREG1	O75629	220 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	PAPSS2	O95340	614 aa	Predicted RBP	4.53	□□□□□ -1.68
ATM-223	ENST00000533979	RLN1	P04808	185 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	MMP2	P08253	660 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	GHR	P10912	638 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	GNAZ	P19086	355 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	YWHAQ	P27348	245 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	CTNNB1	P35222	781 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SSR1	P43307	286 aa	Known RBP	4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SPOCK1	Q08629	439 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SGCB	Q16585	318 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	AARD	Q4LEZ3	155 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	ZNF789	Q5FWF6	425 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SERPINA11	Q86U17	422 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	HAPLN4	Q86UW8	402 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	DZIP1	Q86YF9	867 aa	Known RBP	4.53	□□□□□ -1.68
ATM-223	ENST00000533979	TMC8	Q8IU68	726 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SLC35F3	Q8IY50	421 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	RBFA	Q8N0V3	343 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	FBXO39	Q8N4B4	442 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SLC4A11	Q8NBS3	891 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	GMCL1P1	Q8NEA9	526 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	NEK11	Q8NG66	645 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	LMO3	Q8TAP4	145 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	URGCP	Q8TCY9	931 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	NXNL1	Q96CM4	212 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	C5orf30	Q96GV9	206 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SLC41A2	Q96JW4	573 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	EGLN2	Q96KS0	407 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	HARBI1	Q96MB7	349 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	GFM1	Q96RP9	751 aa	Known RBP	4.53	□□□□□ -1.68
ATM-223	ENST00000533979	NUDCD1	Q96RS6	583 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	KCNK16	Q96T55	309 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	FAM110A	Q9BQ89	295 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	EPB41L5	Q9HCM4	733 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	DNAJC11	Q9NVH1	559 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	P4HTM	Q9NXG6	502 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	HMG20B	Q9P0W2	317 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.53	□□□□□ -1.68
ATM-223	ENST00000533979	SLC24A2	Q9UI40	661 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	FBXW2	Q9UKT8	454 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	NCOA2	Q15596	1464 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	RALGAPB	Q86X10	1494 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	PLEKHH2	Q8IVE3	1493 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	ABCA6	Q8N139	1617 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	NOTCH4	Q99466	2003 aa		4.53	□□□□□ -1.68
ATM-223	ENST00000533979	PLXNC1	O60486	1568 aa		4.53	□□□□□ -1.69
ATM-223	ENST00000533979	UGGT1	Q9NYU2	1555 aa		4.53	□□□□□ -1.69
ATM-223	ENST00000533979	INO80	Q9ULG1	1556 aa	Predicted RBP	4.53	□□□□□ -1.69
ATM-223	ENST00000533979	MTUS2	Q5JR59	1369 aa		4.53	□□□□□ -1.69
ATM-223	ENST00000533979	CHD4	Q14839	1912 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	ZNF541	Q9H0D2	1346 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SHPRH	Q149N8	1683 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979		A0A0U1RQF3	1178 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979		H0YIN7	160 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	TRIM77	I1YAP6	450 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	TOMM70	O94826	608 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SOX30	O94993	753 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SLC16A8	O95907	504 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	ABHD2	P08910	425 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	ETFA	P13804	333 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SRD5A1	P18405	259 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	AHCY	P23526	432 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	TIA1	P31483	386 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
ATM-223	ENST00000533979	PRCP	P42785	496 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	FASLG	P48023	281 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	PPP3CC	P48454	512 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	HNMT	P50135	292 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SORD	Q00796	357 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	NAE1	Q13564	534 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SOWAHA	Q2M3V2	549 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SYTL3	Q4VX76	610 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	KLHL26	Q53HC5	615 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SGO1	Q5FBB7	561 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	NCAPH2	Q6IBW4	605 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	SLC27A1	Q6PCB7	646 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	MFSD7	Q6UXD7	560 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.52	□□□□□ -1.69
ATM-223	ENST00000533979	TRIM74	Q86UV6	250 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	TRIM73	Q86UV7	250 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.52	□□□□□ -1.69
ATM-223	ENST00000533979	ZBTB2	Q8N680	514 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	GJC3	Q8NFK1	279 aa		4.52	□□□□□ -1.69
ATM-223	ENST00000533979	CCDC110	Q8TBZ0	833 aa		4.52	□□□□□ -1.69

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