RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ZFPM2Q8WW38 1151 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 MR1Q95460 341 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ABHD17AQ96GS6 310 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 CAPZA3Q96KX2 299 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 SIGLEC10Q96LC7 697 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 SERPINB12Q96P63 405 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PPP1R2P1Q96PQ5 205 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ARHGAP9Q9BRR9 750 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ZPBPQ9BS86 351 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 TUBB2BQ9BVA1 445 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 DDX47Q9H0S4 455 aaKnown RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 MVB12BQ9H7P6 319 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 FBXO6Q9NRD1 293 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 SLC22A11Q9NSA0 550 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 KCND1Q9NSA2 647 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 DHCR7Q9UBM7 475 aaKnown RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PADI1Q9ULC6 663 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 RIMKLBQ9ULI2 386 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 SOX13Q9UN79 622 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 KCNMB2Q9Y691 235 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PCM1Q15154 2024 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 A0A1W2PPV9 198 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ISM1B1AKI9 464 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 MEN1O00255 615 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 PRMT5O14744 637 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 TP73O15350 636 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF749O43361 778 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 KIF5CO60282 957 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 CTSVO60911 334 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 CREG1O75629 220 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 SLCO2B1O94956 709 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 FTH1P02794 183 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 STATHP02808 62 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 OR56A5P0C7T3 313 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 MAGP20916 626 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 NDUFS1P28331 727 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 GABRB3P28472 473 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 MAGEA3P43357 314 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 NPY2RP49146 381 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ARL4DP49703 201 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ITGA1P56199 1179 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 MAP7Q14244 749 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 KYNUQ16719 465 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ANKRD20A4Q4UJ75 823 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 SYTL3Q4VX76 610 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ARMC6Q6NXE6 501 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF517Q6ZMY9 492 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 TBC1D21Q8IYX1 336 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 DSELQ8IZU8 1212 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 DNAJC22Q8N4W6 341 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 METTL27Q8N6F8 245 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 OTUD6BQ8N6M0 293 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ENDOVQ8N8Q3 282 aaKnown RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 C19orf47Q8N9M1 422 aaKnown RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 HEXDCQ8WVB3 486 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF669Q96BR6 464 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 CD180Q99467 661 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 CARD6Q9BX69 1037 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 TRIT1Q9H3H1 467 aaKnown RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 PDE7BQ9NP56 450 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 C1GALT1Q9NS00 363 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 GEMIN8Q9NWZ8 242 aaKnown RBP9.29□□□□□ -0.92
SSBP3-215ENST00000533946 TLK1Q9UKI8 766 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 SNX12Q9UMY4 172 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 TP53TG5Q9Y2B4 290 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 JRKLQ9Y4A0 524 aa9.29□□□□□ -0.92
SSBP3-215ENST00000533946 HEATR5BQ9P2D3 2071 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-215ENST00000533946 LOC105369274A0A096LPK9 316 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 LOC102723532A0A0G2JNH3 316 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 SUV39H1O43463 412 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 ALOX12BO75342 701 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 NDUFS3O75489 264 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 PIAS1O75925 651 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 HAUS5O94927 633 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 C1orf105O95561 183 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 ACY1Q03154 408 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 RAPSNQ13702 412 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 GBX1Q14549 363 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 ZXDCQ2QGD7 858 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-215ENST00000533946 TYSND1Q2T9J0 566 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 RNASEH2BQ5TBB1 312 aaKnown RBP9.28□□□□□ -0.92
SSBP3-215ENST00000533946 PTRHD1Q6GMV3 140 aaKnown RBP9.28□□□□□ -0.92
SSBP3-215ENST00000533946 FRMPD2BQ6IN97 320 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 CASC4Q6P4E1 433 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 KLHL35Q6PF15 583 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 CREG2Q8IUH2 290 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 SYTL1Q8IYJ3 562 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 OR4N4Q8N0Y3 316 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 ZBTB2Q8N680 514 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF655Q8N720 491 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-215ENST00000533946 ZSCAN1Q8NBB4 408 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 PPFIBP2Q8ND30 876 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 ADAMTS17Q8TE56 1095 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 DLG3Q92796 817 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 SGSM3Q96HU1 749 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 TRIM51Q9BSJ1 452 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 IL22Q9GZX6 179 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 EPN3Q9H201 632 aa9.28□□□□□ -0.92
SSBP3-215ENST00000533946 BFARQ9NZS9 450 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms