RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 RASSF9O75901 435 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 CATP04040 527 aaKnown RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 CHRM5P08912 532 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 FGF3P11487 239 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 CCL4P13236 92 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 ITIH1P19827 911 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 SAT1P21673 171 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 PEBP1P30086 187 aaKnown RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 CSTF2P33240 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 SPRP35270 261 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 ETV5P41161 510 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 RGS4P49798 205 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 RAB28P51157 221 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 IL2P60568 153 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 POU4F1Q01851 419 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 PRKAA1Q13131 559 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 ZNF460Q14592 562 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 GRTP1Q5TC63 336 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 LRRC8EQ6NSJ5 796 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 FOXR1Q6PIV2 292 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 IGF2-ASQ6U949 168 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 LMNTD1Q8N9Z9 388 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 FBXO15Q8NCQ5 510 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 OR2L8Q8NGY9 312 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 FLVCR1-AS1Q8TAF5 88 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 MDM1Q8TC05 714 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 MAGEC3Q8TD91 643 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 DENND1AQ8TEH3 1009 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 KLHL6Q8WZ60 621 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 DLG3Q92796 817 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 PPM1MQ96MI6 270 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 SLC46A1Q96NT5 459 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 CD180Q99467 661 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 ZNF768Q9H5H4 540 aaKnown RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 CAB39LQ9H9S4 337 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 ASCL3Q9NQ33 180 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 OCIAD1Q9NX40 245 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 ACTR10Q9NZ32 417 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 AKAP7Q9P0M2 348 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-214ENST00000533209 DKK4Q9UBT3 224 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 SLC39A10Q9ULF5 831 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 AK5Q9Y6K8 562 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 PIPSLA2A3N6 862 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 GSAPA4D1B5 854 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 C2orf74A8MZ97 194 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 TNFSF15O95150 251 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 WISP3O95389 354 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 JMJD7P0C870 316 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 UGT2B7P16662 529 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 ZNF37AP17032 561 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 PRDX3P30048 256 aaKnown RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 SEPHS1P49903 392 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 PMS2P54278 862 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 TUBB4BP68371 445 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 FBXO38Q6PIJ6 1188 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 UBE2R2Q712K3 238 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 TRMT10CQ7L0Y3 403 aaKnown RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 LSMEM2Q8N112 164 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 MYO1HQ8N1T3 1032 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 C2orf73Q8N5S3 287 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 BMPERQ8N8U9 685 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 OR9A1PQ8NGU1 263 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 UHMK1Q8TAS1 419 aaKnown RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 HMGCLL1Q8TB92 370 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 UBXN4Q92575 508 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 MRRFQ96E11 262 aaKnown RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 PDLIM5Q96HC4 596 aaKnown RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 SLC41A2Q96JW4 573 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 OR2A14Q96R47 310 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 PKP4Q99569 1192 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 RAB11FIP5Q9BXF6 653 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 PITPNM3Q9BZ71 974 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 CCDC86Q9H6F5 360 aaKnown RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 POPDC3Q9HBV1 291 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 SIDT1Q9NXL6 827 aaKnown RBP11.6□□□□□ -0.55
SSBP3-214ENST00000533209 SPATA7Q9P0W8 599 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 PISDQ9UG56 409 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 ADAMTS6Q9UKP5 1117 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 KIF26BQ2KJY2 2108 aa11.6□□□□□ -0.55
SSBP3-214ENST00000533209 A0A087WUV0 522 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 HMX2A2RU54 273 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 EFCAB7A8K855 629 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 CDRT15L2A8MXV6 281 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 B4E171 279 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 SLC16A5O15375 505 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 PHGDHO43175 533 aaKnown RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 RIPK2O43353 540 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ZBTB14O43829 449 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 C8GP07360 202 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ITGA2BP08514 1039 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ABHD2P08910 425 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 ERGP11308 486 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 NELFEP18615 380 aaKnown RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 CDH3P22223 829 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 RBMS1P29558 406 aaKnown RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 TSPAN7P41732 249 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 MLLT3P42568 568 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-214ENST00000533209 SLC12A2P55011 1212 aa11.59□□□□□ -0.55
SSBP3-214ENST00000533209 MC2RQ01718 297 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms