RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TCP1P17987 556 aaKnown RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 KRT15P19012 456 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 PAMP19021 973 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 AK4P27144 223 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 HADHAP40939 763 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ACTR1BP42025 376 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 STAT5AP42229 794 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 KCNJ1P48048 391 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 MANFP55145 182 aaKnown RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ACTR1AP61163 376 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 RAB1AP62820 205 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 BASP1P80723 227 aaKnown RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 INSM1Q01101 510 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 GALNT1Q10472 559 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 CDH17Q12864 832 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 MSLNQ13421 630 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 LSAMPQ13449 338 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 LAMB3Q13751 1172 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ITGA9Q13797 1035 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 POU6F1Q14863 301 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 CHRNA6Q15825 494 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ATP13A5Q4VNC0 1218 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 C14orf28Q4W4Y0 310 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 CT83Q5H943 113 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ZNF648Q5T619 568 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 FAM205BPQ63HN1 556 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 GUSBP11Q6P575 273 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 OGFOD3Q6PK18 319 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 SLC30A9Q6PML9 568 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 PPP1R21Q6ZMI0 780 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 CCNI2Q6ZMN8 369 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ADGRG6Q86SQ4 1221 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 TMPRSS12Q86WS5 348 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 NRROSQ86YC3 692 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 RASGEF1CQ8N431 466 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 GOLGA6L1Q8N7Z2 621 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 RNF152Q8N8N0 203 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 GLIS1Q8NBF1 620 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 KYQ8NBH2 561 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 OR6C4Q8NGE1 309 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 OR52K1Q8NGK4 314 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 MAPK15Q8TD08 544 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ZNF398Q8TD17 642 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ACTRT1Q8TDG2 376 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ADAMTS15Q8TE58 950 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 HDAC10Q969S8 669 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 MAGOHBQ96A72 148 aaKnown RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 RGMAQ96B86 450 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 MAELQ96JY0 434 aaKnown RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 TTC25Q96NG3 672 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 OR2AG1Q9H205 316 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 SMURF1Q9HCE7 757 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 SPATS2LQ9NUQ6 558 aaKnown RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 PIH1D1Q9NWS0 290 aaKnown RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 TAAR2Q9P1P5 351 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ATXN10Q9UBB4 475 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 APPL1Q9UKG1 709 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 SLC39A10Q9ULF5 831 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 PLEKHM1Q9Y4G2 1056 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 KCTD3Q9Y597 815 aa5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P42-201ENST00000532126 ASCC3Q8N3C0 2202 aaKnown RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 COL5A1P20908 1838 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 TMEM131Q92545 1883 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CACNA1AO00555 2505 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CTAGE9A4FU28 777 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 FAM149AA5PLN7 773 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 PGPEP1LA6NFU8 196 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 AP3B1O00203 1094 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CCL22O00626 93 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CLGNO14967 610 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CHUKO15111 745 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 KMOO15229 486 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 ZNF185O15231 689 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 LDB2O43679 373 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 NOBOXO60393 691 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A9O60656 530 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 INMTO95050 263 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 MT-CO3P00414 261 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 APOA4P06727 396 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 RALBP11234 206 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SNRPBP14678 240 aaKnown RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 GLB1P16278 677 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 VCLP18206 1134 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A6P19224 532 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 ITGALP20701 1170 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A1P22309 533 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A4P22310 534 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 AKT1P31749 480 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A3P35503 534 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A5P35504 534 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 GRIA1P42261 906 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 ZNF140P52738 457 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CLDN6P56747 220 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 TMEM115Q12893 351 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 TARDBPQ13148 414 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 NFATC2Q13469 925 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 LAPTM4AQ15012 233 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 TRIP13Q15645 432 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms