RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	ACTL7A	Q9Y615	435 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	GOLGA6L7	A0A1B0GV03	622 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867		A1L4Q6	167 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	STMND1	H3BQB6	276 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	FCHO1	O14526	889 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	MCF2L	O15068	1137 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	TGFB1I1	O43294	461 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	VPS4B	O75351	444 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	NDST3	O95803	873 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	LIF	P15018	202 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	PRLR	P16471	622 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	DDC	P20711	480 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	FPR1	P21462	350 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	GCSH	P23434	173 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	LONP1	P36776	959 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	PLK1	P53350	603 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	AP3M2	P53677	418 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	BPIFB3	P59826	476 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	AP2B1	P63010	937 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	CCL7	P80098	99 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	HMGN5	P82970	282 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	MAMLD1	Q13495	774 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	CUL4B	Q13620	913 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	RAB32	Q13637	225 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	GLIPR1L2	Q4G1C9	344 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	KHDC1	Q4VXA5	237 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	LACTB2	Q53H82	288 aa	Predicted RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	DNAJC21	Q5F1R6	531 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	TPRG1L	Q5T0D9	272 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	HECTD2	Q5U5R9	776 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	ABHD17B	Q5VST6	288 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	ATG16L1	Q676U5	607 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	GPR139	Q6DWJ6	353 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	NADSYN1	Q6IA69	706 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	RPUSD3	Q6P087	351 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	RFWD3	Q6PCD5	774 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867		Q6YL49	198 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	VRK3	Q8IV63	474 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	SLC34A3	Q8N130	599 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	HJURP	Q8NCD3	748 aa	Predicted RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	OR6Y1	Q8NGX8	325 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	CCHCR1	Q8TD31	782 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	LMX1A	Q8TE12	382 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	NOC3L	Q8WTT2	800 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	STON2	Q8WXE9	905 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	CCDC127	Q96BQ5	260 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	SLC45A3	Q96JT2	553 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	COQ10A	Q96MF6	247 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	PRICKLE1	Q96MT3	831 aa	Predicted RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	GFM1	Q96RP9	751 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	IL12RB2	Q99665	862 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	TEX101	Q9BY14	249 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	CLPB	Q9H078	707 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	FZD3	Q9NPG1	666 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	VPS4A	Q9UN37	437 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	NAALADL1	Q9UQQ1	740 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	MTO1	Q9Y2Z2	717 aa	Known RBP	5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	NOX1	Q9Y5S8	564 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	CENPE	Q02224	2701 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	CRYBG3	Q68DQ2	2970 aa		5.67	□□□□□ -1.5
PUM1-222	ENST00000531867	PCNX1	Q96RV3	2341 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	SETD2	Q9BYW2	2564 aa	Predicted RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	PIPSL	A2A3N6	862 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	MBD3L3	A6NE82	208 aa	Predicted RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867		K7EM74	188 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	YY2	O15391	372 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	ACSL4	O60488	711 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	LUC7L3	O95232	432 aa	Known RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	ASS1	P00966	412 aa	Known RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	LDLR	P01130	860 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	RPLP0	P05388	317 aa	Known RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	P4HA1	P13674	534 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	NPPB	P16860	134 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	PSMA4	P25789	261 aa	Known RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	NNMT	P40261	264 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	RABIF	P47224	123 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	STK19	P49842	368 aa	Predicted RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	SEC24C	P53992	1094 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	PRKAA2	P54646	552 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	PFN3	P60673	137 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	SNRPF	P62306	86 aa	Known RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	RPS24	P62847	133 aa	Known RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	MC1R	Q01726	317 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	UBXN1	Q04323	297 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	SULT2A1	Q06520	285 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	SLC13A2	Q13183	592 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	GPR68	Q15743	365 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	SGSM1	Q2NKQ1	1148 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	OR6B2	Q6IFH4	312 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	MSANTD2	Q6P1R3	559 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	SCARA5	Q6ZMJ2	495 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	RAPH1	Q70E73	1250 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	CPLX4	Q7Z7G2	160 aa		5.66	□□□□□ -1.5
PUM1-222	ENST00000531867	PIGZ	Q86VD9	579 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms