RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 AP2A2O94973 939 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 TPBGLP0DKB5 382 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 TPH1P17752 444 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 CACNG1Q06432 222 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 CRB2Q5IJ48 1285 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 MRPL14Q6P1L8 145 aaKnown RBP23.08■■□□□ 1.29
USP47-205ENST00000525257 NAPRTQ6XQN6 538 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 Q6ZS92 163 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 ELMO1Q92556 727 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 CHRNA10Q9GZZ6 450 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 PCDHGA10Q9Y5H3 936 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 ABCA12Q86UK0 2595 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 ANKRD12Q6UB98 2062 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 ACADLP28330 430 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 CTNNA1P35221 906 aaKnown RBP23.07■■□□□ 1.28
USP47-205ENST00000525257 POU6F1Q14863 301 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 TLDC1Q6P9B6 456 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 TBC1D21Q8IYX1 336 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 UBE2Q2Q8WVN8 375 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 CDKN2AIPNLQ96HQ2 116 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 NDC1Q9BTX1 674 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 ATP13A2Q9NQ11 1180 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 OR6C2Q9NZP2 312 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 POLG2Q9UHN1 485 aa23.07■■□□□ 1.28
USP47-205ENST00000525257 MDC1Q14676 2089 aaKnown RBP23.07■■□□□ 1.28
USP47-205ENST00000525257 CCDC78A2IDD5 438 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 ISM1B1AKI9 464 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 ALOX12BO75342 701 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 ITGA3P26006 1051 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 PEBP1P30086 187 aaKnown RBP23.06■■□□□ 1.28
USP47-205ENST00000525257 SOX8P57073 446 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 SYTL3Q4VX76 610 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 TMTC1Q8IUR5 882 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 FAM20CQ8IXL6 584 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 KLHDC8BQ8IXV7 354 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 DNAJC22Q8N4W6 341 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 TTC13Q8NBP0 860 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 OR5K2Q8NHB8 316 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 PIH1D1Q9NWS0 290 aaKnown RBP23.06■■□□□ 1.28
USP47-205ENST00000525257 PLCL2Q9UPR0 1127 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 EFR3BQ9Y2G0 817 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 PCDHA3Q9Y5H8 950 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 PCDHA13Q9Y5I0 950 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 CSAG2Q9Y5P2 127 aa23.06■■□□□ 1.28
USP47-205ENST00000525257 AGPSO00116 658 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 FTH1P02794 183 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 ALAS2P22557 587 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 PTPN7P35236 360 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 NSG1P42857 185 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 TBX2Q13207 712 aaPredicted RBP23.05■■□□□ 1.28
USP47-205ENST00000525257 SLC5A12Q1EHB4 618 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 KCTD11Q693B1 232 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 AADACL2Q6P093 401 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 ARHGEF18Q6ZSZ5 1173 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 STYXQ8WUJ0 223 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 BARD1Q99728 777 aaKnown RBP23.05■■□□□ 1.28
USP47-205ENST00000525257 SLC22A11Q9NSA0 550 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 FBXL4Q9UKA2 621 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 KLHL20Q9Y2M5 609 aa23.05■■□□□ 1.28
USP47-205ENST00000525257 OR51F1A6NGY5 319 aa23.04■■□□□ 1.28
USP47-205ENST00000525257 BHMG1C9JSJ3 638 aaPredicted RBP23.04■■□□□ 1.28
USP47-205ENST00000525257 AP2A1O95782 977 aa23.04■■□□□ 1.28
USP47-205ENST00000525257 AIMP2Q13155 320 aaKnown RBP23.04■■□□□ 1.28
USP47-205ENST00000525257 HIF1AQ16665 826 aa23.04■■□□□ 1.28
USP47-205ENST00000525257 WDR77Q9BQA1 342 aaPredicted RBP23.04■■□□□ 1.28
USP47-205ENST00000525257 SLC6A20Q9NP91 592 aa23.04■■□□□ 1.28
USP47-205ENST00000525257 AGPAT4Q9NRZ5 378 aa23.04■■□□□ 1.28
USP47-205ENST00000525257 EURLQ9NYK6 297 aa23.04■■□□□ 1.28
USP47-205ENST00000525257 POLEQ07864 2286 aa23.04■■□□□ 1.28
USP47-205ENST00000525257 DOCK10Q96BY6 2186 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 SLC5A10A0PJK1 596 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 QSOX1O00391 747 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 MAGP20916 626 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 MSNP26038 577 aaKnown RBP23.03■■□□□ 1.28
USP47-205ENST00000525257 CSE1LP55060 971 aaKnown RBP23.03■■□□□ 1.28
USP47-205ENST00000525257 ITIH4Q14624 930 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 KIR2DS3Q14952 304 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 TTLL10Q6ZVT0 673 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 ST6GALNAC3Q8NDV1 305 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 DLG3Q92796 817 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 ALS2CR12Q96Q35 445 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 LRRC40Q9H9A6 602 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 IMPACTQ9P2X3 320 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 CDC23Q9UJX2 597 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 NOVA2Q9UNW9 492 aaKnown RBP23.03■■□□□ 1.28
USP47-205ENST00000525257 CSMD1Q96PZ7 3565 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 CROCCQ5TZA2 2017 aa23.03■■□□□ 1.28
USP47-205ENST00000525257 TJP3O95049 919 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 METTL18O95568 372 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 ITGAXP20702 1163 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 SPA17Q15506 151 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 PARP6Q2NL67 630 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 PACS1Q6VY07 963 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 TC2NQ8N9U0 490 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 FAM71DQ8N9W8 422 aa23.02■■□□□ 1.28
USP47-205ENST00000525257 DIDO1Q9BTC0 2240 aaKnown RBP23.01■■□□□ 1.27
USP47-205ENST00000525257 KDM1AO60341 852 aa23.01■■□□□ 1.27
USP47-205ENST00000525257 OR56A5P0C7T3 313 aa23.01■■□□□ 1.27
USP47-205ENST00000525257 MMP11P24347 488 aa23.01■■□□□ 1.27
USP47-205ENST00000525257 PKLRP30613 574 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms