RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CDK16Q00536 496 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 KCNC4Q03721 635 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 HSPA14Q0VDF9 509 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 NCF4Q15080 339 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 TMED2Q15363 201 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 TPSAB1Q15661 275 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 ZIC1Q15915 447 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 SLC5A12Q1EHB4 618 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 PTCHD3Q3KNS1 767 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 LCN10Q6JVE6 187 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 UNC5DQ6UXZ4 953 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 LDB1Q86U70 411 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-204ENST00000525207 HOOK3Q86VS8 718 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 PRELID2Q8N945 189 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 LINC01555Q8NAE3 123 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 ASZ1Q8WWH4 475 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 TCTN2Q96GX1 697 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 PANX3Q96QZ0 392 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 CARD6Q9BX69 1037 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 NLNQ9BYT8 704 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 P2RY12Q9H244 342 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 MRM3Q9HC36 420 aaKnown RBP9.12□□□□□ -0.95
SF3B2-204ENST00000525207 SYBUQ9NX95 663 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 GNPTGQ9UJJ9 305 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 ANAPC5Q9UJX4 755 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 TCFL5Q9UL49 500 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 FARSAQ9Y285 508 aaKnown RBP9.12□□□□□ -0.95
SF3B2-204ENST00000525207 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
SF3B2-204ENST00000525207 TDRKHQ9Y2W6 561 aaKnown RBP9.12□□□□□ -0.95
SF3B2-204ENST00000525207 CCDC88CQ9P219 2028 aa9.12□□□□□ -0.95
SF3B2-204ENST00000525207 DOPEY2Q9Y3R5 2298 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 ANKRD12Q6UB98 2062 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 C9J4A7 227 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 CD3EAPO15446 510 aaKnown RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 ZSCAN9O15535 394 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 ZNF749O43361 778 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 HCRTR1O43613 425 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 CEP104O60308 925 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 SLCO2B1O94956 709 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 PDGFAP04085 211 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 RPN2P04844 631 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 APOA4P06727 396 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 HBQ1P09105 142 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 MAGP20916 626 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 RPS3P23396 243 aaKnown RBP eCLIP9.11□□□□□ -0.954e-8■■□□□ 13.9
SF3B2-204ENST00000525207 MGAT1P26572 445 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 AOAHP28039 575 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 CXCR5P32302 372 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 MAGEA6P43360 314 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 KLRB1Q12918 225 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 CHAF1BQ13112 559 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 GRB7Q14451 532 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 KCNJ11Q14654 390 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 KIR2DS3Q14952 304 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 KYNUQ16719 465 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 KCTD19Q17RG1 926 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 TYSND1Q2T9J0 566 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 RHBDD2Q6NTF9 364 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 LRRC8BQ6P9F7 803 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 GSTA5Q7RTV2 222 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 LRRC6Q86X45 466 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 GPR135Q8IZ08 494 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 KRT222Q8N1A0 295 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 N4BP2L2Q92802 583 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 MFSD3Q96ES6 412 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 DPH2Q9BQC3 489 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 KIFC1Q9BW19 673 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 SLC7A5P2Q9GIP4 190 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 HOMER3Q9NSC5 361 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 BFARQ9NZS9 450 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 SERTAD3Q9UJW9 196 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 TLK1Q9UKI8 766 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 TTC7AQ9ULT0 858 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 SOX13Q9UN79 622 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 PPP2R2CQ9Y2T4 447 aa9.11□□□□□ -0.95
SF3B2-204ENST00000525207 PCDHGA9Q9Y5G4 932 aaKnown RBP9.11□□□□□ -0.95
SF3B2-204ENST00000525207 TCRBV7S3A2A0A539 114 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 ARGFXA6NJG6 315 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 ISM1B1AKI9 464 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 NRDCO43847 1150 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 OR2B3O76000 313 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 TMEM63AO94886 807 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 S1PR4O95977 384 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 OGNP20774 298 aaKnown RBP9.1□□□□□ -0.95
SF3B2-204ENST00000525207 CD9P21926 228 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 BDKRB1P46663 353 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 NPY2RP49146 381 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 VPS41P49754 854 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 EIF3BP55884 814 aaKnown RBP9.1□□□□□ -0.95
SF3B2-204ENST00000525207 FOXK1P85037 733 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 TRIP13Q15645 432 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-204ENST00000525207 CTSL3PQ5NE16 218 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 RNF187Q5TA31 235 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-204ENST00000525207 FAM69BQ5VUD6 431 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 ARMC3Q5W041 872 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 PTRHD1Q6GMV3 140 aaKnown RBP9.1□□□□□ -0.95
SF3B2-204ENST00000525207 KIAA0930Q6ICG6 404 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-204ENST00000525207 TTC27Q6P3X3 843 aa9.1□□□□□ -0.95
SF3B2-204ENST00000525207 ASB18Q6ZVZ8 466 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms