RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 OR1L3Q8NH93 324 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 FLVCR1-AS1Q8TAF5 88 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 CT55Q8WUE5 264 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 STARD8Q92502 1023 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 WBP1Q96G27 269 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 PWWP2AQ96N64 755 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 FCRL4Q96PJ5 515 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 RUFY1Q96T51 708 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 TRIM51Q9BSJ1 452 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 EFHD1Q9BUP0 239 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 FAM60AQ9NP50 221 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 LHX9Q9NQ69 397 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 KLHL20Q9Y2M5 609 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 MAP3K7O43318 606 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 HCRTR1O43613 425 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 KDM1AO60341 852 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 USP1O94782 785 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 ESR1P03372 595 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 MT-ND3P03897 115 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 RPN2P04844 631 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 ITGB2P05107 769 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 PKMP14618 531 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 TCN2P20062 427 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 IVDP26440 423 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 PKLRP30613 574 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 PAFAH1B1P43034 410 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 MRPS25P82663 173 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 DR1Q01658 176 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 DHX9Q08211 1270 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZIC1Q15915 447 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 LONRF1Q17RB8 773 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 DEFB110Q30KQ9 67 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 BBS9Q3SYG4 887 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 MSS51Q4VC12 460 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 ACSBG2Q5FVE4 666 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 HP1BP3Q5SSJ5 553 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 PLEKHS1Q5SXH7 462 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 ARMC3Q5W041 872 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZNF549Q6P9A3 640 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 DCUN1D3Q8IWE4 304 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZNF843Q8N446 348 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 C19orf47Q8N9M1 422 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 LINC01555Q8NAE3 123 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 SLC38A9Q8NBW4 561 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 SLCO2A1Q92959 643 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 SLC30A3Q99726 388 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 MENTQ9BUN1 341 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 FANCEQ9HB96 536 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 IARS2Q9NSE4 1012 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 OR6C2Q9NZP2 312 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 SLC39A10Q9ULF5 831 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 FAM169AQ9Y6X4 670 aa12.41□□□□□ -0.42
TRAPPC4-205ENST00000525079 A0A0J9YY10 115 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 E5RI56 91 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 H3BMM5 538 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 TERTO14746 1132 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 TTI1O43156 1089 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 CPNE3O75131 537 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 HAUS5O94927 633 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 C1orf105O95561 183 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 CYP2A7P20853 494 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 CD9P21926 228 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 SLC1A2P43004 574 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 RAB28P51157 221 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 MPP1Q00013 466 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 C19orf57Q0VDD7 668 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 CDC20Q12834 499 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 GPS2Q13227 327 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 DNASE1L3Q13609 305 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 ERV3-1Q14264 604 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 KIR2DS3Q14952 304 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 DEFB109BQ30KR1 87 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 HSP90AA5PQ58FG0 334 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 LCN10Q6JVE6 187 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 TTC23LQ6PF05 361 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 PCGF5Q86SE9 256 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 IGDCC3Q8IVU1 814 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZBTB2Q8N680 514 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 OR8K5Q8NH50 307 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 MR1Q95460 341 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 CLIP3Q96DZ5 547 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 MED8Q96G25 268 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 SPRTNQ9H040 489 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 INTS10Q9NVR2 710 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 SERTAD3Q9UJW9 196 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 FBXO5Q9UKT4 447 aa12.4□□□□□ -0.42
TRAPPC4-205ENST00000525079 LOC400499M0QZD8 3231 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 RASGRF2O14827 1237 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 CTSBP07858 339 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 FURINP09958 794 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 ERVK-10P10266 1014 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 PGAM1P18669 254 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 ADARP55265 1226 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 RPS18P62269 152 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 CUL1Q13616 776 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 GBX1Q14549 363 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms