RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 SEPT6Q14141 434 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 GPR19Q15760 415 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 LONRF2Q1L5Z9 754 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 SKOR2Q2VWA4 1001 aaPredicted RBP7.8□□□□□ -1.16
PVT1-213ENST00000522414 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.8□□□□□ -1.16
PVT1-213ENST00000522414 LACTB2Q53H82 288 aaPredicted RBP7.8□□□□□ -1.16
PVT1-213ENST00000522414 DNTTIP2Q5QJE6 756 aaKnown RBP7.8□□□□□ -1.16
PVT1-213ENST00000522414 ANKRD20A2Q5SQ80 823 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 CCDC181Q5TID7 509 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 ANKRD20A1Q5TYW2 823 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 ANKRD20A3Q5VUR7 823 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 ZDHHC20Q5W0Z9 365 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 LCN10Q6JVE6 187 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 BBS12Q6ZW61 710 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 CNGA4Q8IV77 575 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 PHC3Q8NDX5 983 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 OR13C4Q8NGS5 318 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 CCDC110Q8TBZ0 833 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 ACTL9Q8TC94 416 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 UBXN4Q92575 508 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 C12orf66Q96MD2 445 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 VAT1Q99536 393 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 FSD1LQ9BXM9 530 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 TRIM55Q9BYV6 548 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 ACTL8Q9H568 366 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 PDE7BQ9NP56 450 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 FGF21Q9NSA1 209 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.8□□□□□ -1.16
PVT1-213ENST00000522414 SLC24A2Q9UI40 661 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 ANAPC2Q9UJX6 822 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 RARRES3Q9UL19 164 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 ACSL5Q9ULC5 683 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 PCDHA3Q9Y5H8 950 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 EPN1Q9Y6I3 576 aaPredicted RBP7.8□□□□□ -1.16
PVT1-213ENST00000522414 NOTCH2Q04721 2471 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 MED13Q9UHV7 2174 aa7.8□□□□□ -1.16
PVT1-213ENST00000522414 TEX15Q9BXT5 2789 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 UNC79Q9P2D8 2635 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 GOLGA6L3A6NEY3 463 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 C5orf60A6NFR6 353 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 SLC9B1P1A6NJY1 282 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 C2orf81A6NN90 581 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 HACD1B0YJ81 288 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 APOC4-APOC2K7ER74 178 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 KCNN4O15554 427 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 ANXA9O76027 345 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 APOC2P02655 101 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 RBP3P10745 1247 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 PYGMP11217 842 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 POLR2CP19387 275 aaPredicted RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 PSMB4P28070 264 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 PDHA2P29803 388 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 CCL11P51671 97 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 KPNA2P52292 529 aaKnown RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 GEMP55040 296 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 EIF3EP60228 445 aaKnown RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 HSD11B2P80365 405 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 ID3Q02535 119 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 CHAF1BQ13112 559 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 PRKG2Q13237 762 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 ITGA9Q13797 1035 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 KRT33BQ14525 404 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 SPA17Q15506 151 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 TAF1AQ15573 450 aaPredicted RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 CAPRIN2Q6IMN6 1127 aaKnown RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 DENND5AQ6IQ26 1287 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 KLHL35Q6PF15 583 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 DARS2Q6PI48 645 aaKnown RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 ASB18Q6ZVZ8 466 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 D2HGDHQ8N465 521 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 CLDN19Q8N6F1 224 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 TEX19Q8NA77 164 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 OR2L2Q8NH16 312 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 ZNF501Q96CX3 271 aaPredicted RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 RBM41Q96IZ5 413 aaKnown RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 ZNF514Q96K75 400 aaPredicted RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 FERD3LQ96RJ6 166 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 OSBPL8Q9BZF1 889 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 TRIM5Q9C035 493 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 KLHL25Q9H0H3 589 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 GBA3Q9H227 469 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 CHST8Q9H2A9 424 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 KCND1Q9NSA2 647 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 KCND3Q9UK17 655 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 POLHQ9Y253 713 aa7.79□□□□□ -1.16
PVT1-213ENST00000522414 FARSAQ9Y285 508 aaKnown RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.79□□□□□ -1.16
PVT1-213ENST00000522414 SPTBN1Q01082 2364 aaKnown RBP7.79□□□□□ -1.16
PVT1-213ENST00000522414 MACROD2A1Z1Q3 448 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 SOWAHDA6NJG2 315 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 AGAP14A8MT82 685 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 MKRN2OSH3BPM6 223 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 BTN3A3O00478 584 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 LDB2O43679 373 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 SCRG1O75711 98 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 MT-ND3P03897 115 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 PTPN4P29074 926 aa7.78□□□□□ -1.16
PVT1-213ENST00000522414 PRDX3P30048 256 aaKnown RBP7.78□□□□□ -1.16
PVT1-213ENST00000522414 NAP1L1P55209 391 aaKnown RBP7.78□□□□□ -1.16
PVT1-213ENST00000522414 RPS15P62841 145 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms