RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ASB18Q6ZVZ8 466 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 TAX1BP1Q86VP1 789 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 GPR135Q8IZ08 494 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 OTUD6BQ8N6M0 293 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 ASZ1Q8WWH4 475 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 TCTN2Q96GX1 697 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 IL17FQ96PD4 163 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 NLNQ9BYT8 704 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 IL22Q9GZX6 179 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 SYBUQ9NX95 663 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 TCFL5Q9UL49 500 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 KLHL20Q9Y2M5 609 aa19.98■□□□□ 0.79
SDCBP-209ENST00000522243 KDM1AO60341 852 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 NDUFS3O75489 264 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 OR2B3O76000 313 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 CBSLP0DN79 551 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 AOAHP28039 575 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 PKLRP30613 574 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 CBSP35520 551 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 TTPAP49638 278 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 VPS41P49754 854 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 CCL11P51671 97 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 KYNUQ16719 465 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 C1orf189Q5VU69 101 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 C4orf22Q6V702 233 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 PRELID2Q8N945 189 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 TEX19Q8NA77 164 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 ADAMTS17Q8TE56 1095 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 MFSD3Q96ES6 412 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 P2RY12Q9H244 342 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 ACSS2Q9NR19 701 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 PPP2R2CQ9Y2T4 447 aa19.97■□□□□ 0.79
SDCBP-209ENST00000522243 GOLGA8KD6RF30 607 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 GOLGA8TH3BQL2 631 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 HBQ1P09105 142 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 AGXTP21549 392 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 RAB28P51157 221 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 EIF3BP55884 814 aaKnown RBP19.96■□□□□ 0.79
SDCBP-209ENST00000522243 GRB7Q14451 532 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 KIR2DS3Q14952 304 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 SLC5A12Q1EHB4 618 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 ZNF385CQ66K41 422 aaPredicted RBP19.96■□□□□ 0.79
SDCBP-209ENST00000522243 LRRC8BQ6P9F7 803 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 LINC01555Q8NAE3 123 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 MENTQ9BUN1 341 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 ING2Q9H160 280 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 IRAK4Q9NWZ3 460 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 CCDC88CQ9P219 2028 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 FER1L5A0AVI2 2057 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 BOD1L1Q8NFC6 3051 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 TLN1Q9Y490 2541 aaKnown RBP19.96■□□□□ 0.79
SDCBP-209ENST00000522243 BSNQ9UPA5 3926 aa19.96■□□□□ 0.79
SDCBP-209ENST00000522243 H3BMH7 237 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 SLCO2B1O94956 709 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 VAPBO95292 243 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 TPSB2P20231 275 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 MAGP20916 626 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 CD9P21926 228 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 ARNTP27540 789 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 NCF4Q15080 339 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 TMED2Q15363 201 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 TPSAB1Q15661 275 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 MLIPQ5VWP3 458 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 DCUN1D3Q8IWE4 304 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 DNAJC22Q8N4W6 341 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 ZNF655Q8N720 491 aaPredicted RBP19.95■□□□□ 0.78
SDCBP-209ENST00000522243 PANX3Q96QZ0 392 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 KIFC1Q9BW19 673 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 DHCR7Q9UBM7 475 aaKnown RBP19.95■□□□□ 0.78
SDCBP-209ENST00000522243 GNPTGQ9UJJ9 305 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 TSR3Q9UJK0 312 aaKnown RBP19.95■□□□□ 0.78
SDCBP-209ENST00000522243 RUVBL2Q9Y230 463 aaKnown RBP19.95■□□□□ 0.78
SDCBP-209ENST00000522243 NFS1Q9Y697 457 aa19.95■□□□□ 0.78
SDCBP-209ENST00000522243 MED13Q9UHV7 2174 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 C9J4A7 227 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 AP3B1O00203 1094 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 AVILO75366 819 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 TMEM63AO94886 807 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 RPN2P04844 631 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 BDKRB1P46663 353 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 GPS1Q13098 491 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 CTSL3PQ5NE16 218 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 UNC5DQ6UXZ4 953 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 ZBTB2Q8N680 514 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 SKA2Q8WVK7 121 aaPredicted RBP19.94■□□□□ 0.78
SDCBP-209ENST00000522243 SLC25A23Q9BV35 468 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 HOMER3Q9NSC5 361 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.94■□□□□ 0.78
SDCBP-209ENST00000522243 SLC39A10Q9ULF5 831 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 AP1M2Q9Y6Q5 423 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 PCSK5Q92824 1860 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 TENM4Q6N022 2769 aa19.94■□□□□ 0.78
SDCBP-209ENST00000522243 KRT87PA6NCN2 255 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 RPS3P23396 243 aaKnown RBP eCLIP19.93■□□□□ 0.782e-6■■■□□ 16
SDCBP-209ENST00000522243 FMO4P31512 558 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 FOXK1P85037 733 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 KCNJ11Q14654 390 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 SLC9A5Q14940 896 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 CCSMST1Q4G0I0 132 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 RHBDD2Q6NTF9 364 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms